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Detailed information on CNT30370781


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SGY7|PEK11_ARATH, E-value = 8e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694963Oryza glumipatulaOryza sativa15.6680.3697.29221forward
CNT30596580Oryza glumipatulaOryza meridionalis27.542.593.04388forward
CNT30102507Oryza glumipatulaOryza rufipogon31.6861.0797.99447forward
CNT30117205Oryza glumipatulaOryza nivara43.4452.2198.21613forward

Expression of CNT30370781

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MDLLVVIMVFALPLHLRNDRQLRLQWPALLPAMVKMESDRSATVASGVHPALVVVHSTLVVVVDQVLAAYQDWVLAIGQALVAH*

>peptide 2 (34 aa)
MGCGGWSGFGGTLGLGSGGPSGLGCGGWSGLDGS*

>peptide 3 (33 aa)
MNASVCSYTHIIESIYYKQIYEYMISRPQRRDM*

>peptide 4 (30 aa)
MKPNVESERINLNGPLGGHHGFCPAVTPQE*

Sequence

>CNT30370781
ATTTTCTTTCATCATGCGGTCAATGAATCGATGGCAATGATGACTGATGAATGCAAGTGTGTGCTCATATACACACATAATTGAATCCATTTATTATAAA
CAAATATATGAATATATGATCTCACGCCCTCAAAGAAGAGATATGTGAGCTCATAGCAACAAACTCAGAAAGTAACACACATCTACACGGATGACAGACA
TGGCATGCACGCCGTTGATACAATAAAGAAATACACAAATGAAACCAAATGTAGAATCTGAACGTATCAATCTGAATGGACCTCTTGGTGGTCATCATGG
TTTTTGCCCTGCCGTTACACCTCAGGAATGACCGGCAGCTCCGGCTTCAGTGGCCGGCGCTTCTTCCGGCTATGGTGAAAATGGAATCTGACCGTTCGGC
AACGGTGGCATCTGGGGTGCATCCGGCTTTGGTGGTTGTTCATAGTACTCTGGTTGTGGTGGTTGATCAGGTTTTGGCGGCATATCAGGATTGGGTCTTG
GCGATTGGTCAGGCTTTGGTGGCCCATTAGAAATAGGCTGTGGCGGCTGGTCAGGTTTCGGTGGCCCATTAGGATTGGGCTGTGGAGGTTGGTCAGGTTT
CGGTGGCCCATTAGGATTGGGCTGTGGAGGTTGGTCAGGTTTCGGTGGCCCACCAGGACAAGGTTGGGGTGGTTGGTCTGGCTTTGGTGGCATATCGGGA
TTGGGCTGCGGTGGCTGGTCAGGCTTTATCGGCCCATTCGGTATAGGTTGTGGTGGTTGATCGGGTTGTATTGGTCCGGCAGGGTTGGGTTGTGGCGGCT
GGTCCGGCTTTGATGGCATGTCAGCACTGGGCTGTGGGGGTTGGTCAGGTTTGAACGGCATATAAGGATTGGATATTGCAGGCACATCAAGTTTCGGTGA
TCCATCAGGATTGGCCTGGAGTGGTTGGTCGGGCATTGGTGGCGTATCAAGATTAGGCAGTGATGACCCATCAAGTCTAGGTTGTGGTGGTTGGTTAGGG
ATTGATGGCCCATTTGGATTGGGTTGTGTTGATTGGTCCGGCACCGAAGGCGCATAAGGATTGGTTGACCCATCAGGTTTAGGCATTGACAGCATATCAG
GCTTCGGTGGCCCATTAGGAATGGGCTGTGGTGGTTGGTCAGGCTTTGGCGGCACATTAGGATTAGGCAGTGGTGGCCCATCGGGTTTAGGTTGTGGCGG
CTGGTCGGGTCTTGATGGCTCATAAGTATTGGGCAACCCATCAGGTTTAGGCATCGGTGGCATATCAGGCTTTGGCGGCTCATTAGGATTGGGTTGTGGT
GGTTGATTAGGATTCGGCAATGGTGGCCCATCAGGTTTAGGTTGTGGTGGTTGATCAGGACATGGTTGTGCCGGGGGGATGGGTGGCCCATCGGGTTTAG
GCATCGGCGGC