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Detailed information on CNT30370767


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695200Oryza glumipatulaOryza sativa72.5997.6191.64694forward
CNT30554501Oryza glumipatulaOryza glaberrima89.7598.1798.02858forward
CNT30604356Oryza glumipatulaOryza punctata89.7593.8790.09858forward

Expression of CNT30370767

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MSGTFAANAMTSAKWKHSERIDLLISLSLQTLLLTLDSTQAVVA

Sequence

>CNT30370767
CCTTGAGTCACATCAGTAGAACAGATACAATTTCATAAAATAGCCCAGAAATATTGACACACAGGGATACATGCTCTTTTTATTGATGGTATGTACGCTA
TATGCTTTATTATAAGAAGCACGCCTGCTCATAAGCAACGGCATTAAGAAAACACATAGATAGCCACATGGACACACTAGTGAACAACACAAGAAAAACA
CACAAATAGTCACTAGAGCAATAGTACATACCAAAAGTATGCGGGATCACACGTAGCAAACAACCAAGTCTACTCAGTTCCTGGGCACAATTATAGCTAT
TGCTGGTGAAAGAGGTGGCAGCTTTGGTAGAGATGGCTCTGGCTGAGGCTTGGGTTTTGGCTTAGGATCAGGCTGTGGCTCAGGCTTGGGATTAGGATTT
GGCTTGGGTTAGGACTCGGCTCAGGTTTGGGTTCAGGTTTTGGCTCCGGCTTAGGATTTGGGCTCAGCTCCGGTTGTGGCTTAGGCTTTGGATTTGGTTT
TGGGTCAGCTTTGGGGCTAGGTTGTGGGTTCGGTTGAGGATTTTGTTTTGGGTCAGGCTGTGGTGTAGGTTTTGGGTCAGGCTGCGGCAATTGTTTTGGA
TCCAGCTATGGGTTTGGTTGAGGATCTTGTTTTGGTTCAGGCTGTGGTGTAGGTTTTGGATTAGACTGCGGTGATAGTTTTGGATCTGGCTGTGGGTTTG
GTTGAGGGTTAGGCTGTGGACTGGGCTTTGTCTCTAGTTGTGGTTTTGGTGTTGGGTCAGGTTTAGGCTTGGGATCTGCTGGCTTTGGATCAGATTTAGC
TTCAATCACGCGTCCATTGGCAATGTCAGGAACATTTGCTGCCAATGCAATGACAAGCGCCAAATGGAAGCACAGTGAGAGGATTGATCTCCTCATCTCG
TTGTCACTGCAAACTCTACTACTCACTCTTGATAGTACACAAGCTGTGGTAGCTAG