Detailed information on CNT30370686


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577053Oryza glumipatulaOryza barthii61.0784.4299.66298forward

Expression of CNT30370686

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLLLICDGDTILYMYLSTSCVNISYVSNDWR

>peptide 2 (91 aa)
XVLVVALARVVELVVVLGKVVALGAVADLVEAVVEVVEDLVAVEAVGLAVVLGRVVDLVSVLAAEGSVASTNTLVPYFVSVLLHSMGHHGI*

>peptide 3 (71 aa)
XGLGGGFGKGGGIGGGFGKGGGLGGGGGLGGGGGGGGGGFGGGGGSGIGGGFGKGGGFGFGVGGGGIGGKH*

>peptide 4 (96 aa)
WXSWWWLWQGWWNWWWFWERWWPWGRWRTWWRRWWRWWRIWWRWRQWDWRWFWEGWWIWFRCWRRRDRWQALIHWYLTSFQFSCTPWAIMVFSLSE*

Sequence

>CNT30370686
TGGNGGTCTTGGTGGTGGCTTTGGCAAGGGTGGTGGAATTGGTGGTGGTTTTGGGAAAGGTGGTGGCCTTGGGGGCGGTGGCGGACTTGGTGGAGGCGGT
GGTGGAGGTGGTGGAGGATTTGGTGGCGGTGGAGGCAGTGGGATTGGCGGTGGTTTTGGGAAGGGTGGTGGATTTGGTTTCGGTGTTGGCGGCGGAGGGA
TCGGTGGCAAGCACTAATACACTGGTACCTTACTTCGTTTCAGTTCTCTTGCACTCCATGGGCCATCATGGTATTTAGCTTGAGCGAGTAGCTGCAATAT
TATGTAGGCTTTTGTTGTGGAGCTTATAGCAGTACTGTTGCGTTTGATGGTTTCTCCCCTTCGGACGTTTGGATAAGTCTGTTGGTACCCTATATGTTGT
TATTAATTTGTGACGGTGATACCATATTATATATGTACTTAAGTACTTCATGTGTCAACATATCATATGTTTCGAACGATTGGAGGTA