« Back to Oryza glumipatula search


Detailed information on CNT30370677


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694748Oryza glumipatulaOryza sativa38.3452.1895.82383forward
CNT30576976Oryza glumipatulaOryza barthii76.88100.3995.57768forward

Expression of CNT30370677

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MSGTFAANAMTSAKWKHSERIDLLISLSLQTLLLTLDSTQAVVA

Sequence

>CNT30370677
GTAGAACAGATACAATTTCATAAAATAGCCCAGAAATATTGACACACAGGGATACATGCTCTTTTTATTGATGGTATGTACGCTATATGCTTTATTATAA
GAAGCACGCCTGCTCATAAGCAACGGCATTAAGAAAACACATAGATAGCCACATGGACACACTAGTGAACAACACAAGAAAAACACACAAATAGTCACTA
GAGCAATAGTACATACCAAAAGTATGCGGGATCACACGTAGCAAACAACCAAGTCTACTCAGTTCCTGGGCACAATTATAGCTATTGCTGGTGAAAGAGG
TGGCAGCTTTGGTAGAGATGGCTCTGGCTGAGGCTTGGGTTTTGGCTTAGGATCAGGCTGTGGCTCAGGCTTGGGATTAGGATTTGGCTTGGGTTAGGAC
TCGGCTCAGGTTTGGGTTCAGGTTTTGGCTCCGGCTTAGGATTTGGGCTCAGCTCCGGTTGTGGCTTAGGCTTTGGATTTGGTTTTGGGTCAGCTTTGGG
GCTAGGTTGTGGGTTCGGTTGAGGATCTTGTTTCGGGTCAGGCTATGGCGCTGGTTTCGGGTCAGGCTGTGGGTTCGGCTGAGGATCTTGTTTTGGGTTA
GGTTGCGGCGTTGGTTTTGGGTCAGGTTGTGGGTTCGGTTGAGGATTTTGTTTTGGGTCAGGCTGTGGTGTAGGTTTTGGGTCAGGCTGTGGTGTAGGTT
TTGGATTAGACTGCGGTGATAGTTTTGGATCTGGCTGTGGGTTTGGTTGAGGGTTAGGCTGTGGACTGGGCTTTGTCTCTAGTTGTGGTTTTGGTGTTGG
GTCAGGTTTAGGCTTGGGATCTGCTGGCTTTGGATCAGATTTAGCTTCAATCACGCGTCCATTGGCAATGTCAGGAACATTTGCTGCCAATGCAATGACA
AGCGCCAAATGGAAGCACAGTGAGAGGATTGATCTCCTCATCTCGTTGTCACTGCAAACTCTACTACTCACTCTTGATAGTACACAAGCTGTGGTAGCT