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Detailed information on CNT30370675


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8H3P9|HAK7_ORYSJ, E-value = 1e-77

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102427Oryza glumipatulaOryza rufipogon76.4484.7299.65571forward
CNT30117155Oryza glumipatulaOryza nivara53.68100100401forward

Expression of CNT30370675

Peptides detected in this lncRNA

>peptide 1 (40 aa)
LLRNLKTDSATPAETTGLLLVDGLEAPERLRPAAPCQGRA*

>peptide 2 (37 aa)
MRPIPGTRTIPRLGPSVRIHFIETLFWRSNRYFLREP*

>peptide 3 (49 aa)
MDWRLRSVSDLLLLVRDVPEASLLESLITRPVPVVSSVCMTAILPSEDS*

>peptide 4 (72 aa)
MHRYIRYSLGPIRPMRYGLDANEDQNLMESRQVGDKVREDGRHPGDQLCVDETDSRHPNDPKARTKCQDPFH*

Sequence

>CNT30370675
CTCCTCCGCAATCTCAAAACGGACTCTGCGACGCCGGCTGAGACTACCGGACTCCTGCTCGTAGATGGACTGGAGGCTCCGGAGCGTCTCCGACCTGCTG
CTCCTTGTCAGGGACGTGCCTGAAGCCTCGTTATTGGAGTCCCTCATCACCAGACCGGTGCCGGTTGTGTCCTCTGTGTGTATGACAGCCATCCTCCCTT
CCGAAGATTCGTAGCTCCCAGAGGAGGCTGCCTCCTCGGCTTCCATTTGGATGAACTTGGCAATGCTCATCACCAAGTGGTTCTCAAAGTTCTCGTCATC
TTTCTGCACATCTTTGTAGCCATACCTCACGATGCACCGGTACATACGGTATTCCCTGGGGCCGATCCGTCCAATGAGGTACGGACTTGACGCAAACGAA
GACCAGAACCTGATGGAAAGCAGGCAGGTTGGTGACAAAGTGCGAGAAGATGGAAGGCACCCCGGTGACCAGCTCTGTGTAGATGAGACCGATTCCAGGC
ACCCGAACGATCCCAAGGCTCGGACCAAGTGTCAGGATCCATTTCATTGAGACCTTGTTCTGGAGATCAAACAGGTACTTCCTCCGAGAGCCGTAGTGCC
ATACGTACATGACGAGCATGAACACGAAGGCAAATACGATTGGCGCCCATCCTCCCTGAGGAACTTTAGTGACTGCTGCCGACAGGTACACCGCTTCGAT
TGACCCAAACGCCACGACAAATAACAAGGCGAGCAGGATGTTTTTTT