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Detailed information on CNT30370667


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671641Oryza glumipatulaSetaria viridis27.4332.3488.65141forward
CNT30554357Oryza glumipatulaOryza glaberrima86.9610099.55447forward
CNT30252593Oryza glumipatulaAvena sativa29.3827.1682.12151forward
CNT30102728Oryza glumipatulaOryza rufipogon92.4193.8798.74475forward
CNT30117104Oryza glumipatulaOryza nivara95.9180.1696.15493forward
CNT30551372Oryza glumipatulaOryza brachyantha55.0659.0885.16283forward

Expression of CNT30370667

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MISIQGSDRGVSVNEGEGEDQVRLTGSKRKFLSDGVRLPCAASATSGRTIAAAMAAAVSPAVALSFIDADALTAILAAAAGLAL

Sequence

>CNT30370667
CTGCTGTCCTGAGATTGAATTTCAGTGGCTTTTTTATCTAGTGTAGTTCATATTTACAGCAGTTAAAAAAAAATACAGTAGCACTGATCAGTAGCTTCGG
GAGCAAACAATATTTGGAAACTAGTAGCCTTTTGCGCAGGTATAGTGTCAAGAACAATATACAGCAATAGAATTATGGAAGCAATTAACCATCAACAACT
CCATATCTCCATATCGTAAATCAGTTTACAGAATCTCCAAAACAACACTGCAAAGAGACGATGATCTCGATACAAGGCAGCGATCGAGGCGTGTCTGTGA
ATGAAGGAGAAGGAGAAGATCAGGTCCGCTTGACGGGGTCGAAGAGGAAGTTCTTGAGCGACGGCGTCAGGCTGCCCTGCGCGGCCTCCGCGACGTCGGG
GAGGACCATCGCCGCCGCCATGGCCGCGGCCGTCAGCCCGGCCGTCGCCCTCTCCTTCATCGACGCCGACGCCCTCACGGCCATACTCGCCGCCGCCGCC
GGCCTCGCCCTCGG