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Detailed information on CNT30370617


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0D5P8|PSBQ_ORYSJ, E-value = 5e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694735Oryza glumipatulaOryza sativa63.6422.198.86175forward
CNT30671430Oryza glumipatulaSetaria viridis34.5537.790.5395forward
CNT30520717Oryza glumipatulaSetaria italica50.9119.1890.71140forward
CNT30179895Oryza glumipatulaSecale cereale52.3654.1488.89144forward
CNT30290295Oryza glumipatulaTriticum aestivum64.7327.4391.01178forward
CNT30385644Oryza glumipatulaTriticum turgidum76.7327.0292.42211forward
CNT30554363Oryza glumipatulaOryza glaberrima90.9110.4196.4250forward
CNT30659718Oryza glumipatulaTriticum dicoccoides8032.3587.27220forward
CNT30453977Oryza glumipatulaSaccharum spontaneum61.0956.7691.07168forward
CNT304156Oryza glumipatulaZea mays6040.8490.91165forward
CNT30680164Oryza glumipatulaTriticum urartu8033.7988.64220forward
CNT30351417Oryza glumipatulaEragrostis tef42.9154.8891.53118forward
CNT30362913Oryza glumipatulaSorghum bicolor40.3639.6490.99111forward
CNT30148624Oryza glumipatulaBrachypodium distachyon57.0937.3892.99157forward
CNT30581445Oryza glumipatulaEchinochloa crusgalli61.4524.4291.72169forward
CNT30496557Oryza glumipatulaDigitaria exilis5665.5390.91154forward
CNT30117138Oryza glumipatulaOryza nivara82.5518.8799.12227forward

Expression of CNT30370617

Sequence

>CNT30370617
GGAATAATAAATTTGAAGAGAAGACTCTGTAGTGAAGTGAAGCTAAATTAGTTACCCCGTCAATGGTGGCGAAGAGCTTGCCGGTGAGGTCGTAGCGCAG
GTAGGAGGCCCTGAGGCGGAGGTCGTCCCTGACGAACGGCCACTGCTTCTTCTCGATGAGCGGCTTGAGGTTGATGATGTCCTGGGCCGACTCCTTCGCC
CTCGCCGCCGCCTCCGCCGGCGGCAGCGGCTGCAGGTAGAACCTCTCCTTCAGCGGCAGGTCCGTGTCCCTCGCC