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Detailed information on CNT30369684


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670986Oryza glumipatulaSetaria viridis13.4627.7687.588forward
CNT30519967Oryza glumipatulaSetaria italica28.4416.4383.33186forward

Expression of CNT30369684

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MRPRHGASERNTRYSTNSAKKNMQAKIIKQCKFWNPAMYYFSSNA*

>peptide 2 (43 aa)
LIKLHLHIRLTGLQIIRAASCDHKSQIPSPLCPNALTLMNYFL*

>peptide 3 (36 aa)
MSMSSGSMRVLTRTFFAPVRFCTCCAICARSCDSSCT

Sequence

>CNT30369684
CTAATTAAACTGCATTTGCATATTAGATTGACAGGTTTGCAGATTATAAGAGCAGCCTCATGTGATCACAAAAGCCAAATTCCTTCGCCACTTTGCCCTA
ATGCCCTCACACTTATGAACTACTTTCTATGATTGTTTTCTCTGCTCCATCGCACAAGACAATCTTCTACAGTTCTACTCTGAACTTGGCAGAGCAAATC
TATTGAAAACTTCCCCCATGAGGCCGAGACATGGAGCTAGTGAACGCAACACACGCTACTCTACAAATTCTGCTAAAAAAAATATGCAGGCCAAGATAAT
CAAACAGTGCAAATTTTGGAATCCAGCTATGTATTATTTCAGCAGTAATGCTTAGCAAACATTCAACAATCACATGAGAGCAATGTATGTTGCACTTGCA
CAAGAGTAAGAGACAACAGGAGGAGAGGACCTAAGGGCCAAGGCAGCGCCGCCGGGAGGGTGGTGGATGCCGATCAGACGTCGAGGGTTACTGCGGGCAT
CTCGAACTCGGAGGTGATCTCCTCGATCTGCTTCCGGACGCTCATGTCGATGAGCTCCGGGTCGATGCGGGTCTTGACCCGGACGTTCTTCGCGCCGGTG
AGATTCTGCACCTGCTGCGCGATCTGCGCGAGGTCCTGCGACTCGAGCTGCACG