Detailed information on CNT30369658


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002760, E-value = 3e-104

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691044Oryza glumipatulaOryza sativa10026.9796.8219forward
CNT30109832Oryza glumipatulaOryza longistaminata87.2158.2392.67191forward
CNT30575314Oryza glumipatulaOryza barthii10021.6697.72219forward
CNT30115936Oryza glumipatulaOryza nivara10028.5597.72219forward

Expression of CNT30369658

Peptides detected in this lncRNA

>peptide 1 (56 aa)
QVRYATHVHAAHADADHYHVVVVLFVTALSKFNCFDVLYFLIRFYFIIYQFRSTYM*

Sequence

>CNT30369658
TCAAGTCCGATATGCAACCCATGTCCATGCTGCTCATGCGGATGCTGATCATTACCATGTCGTCGTTGTTCTCTTCGTAACCGCATTGAGCAAATTCAAT
TGTTTTGATGTTTTGTATTTCCTCATCAGGTTCTATTTTATAATATACCAATTCAGAAGCACATACATGTAGTACAATTCAACACATCAATCAATGGCTT
ATCATCAGCTGATAACAAC