Detailed information on CNT30369302


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689948Oryza glumipatulaOryza sativa72.9359.0190.42167forward
CNT30552364Oryza glumipatulaOryza glaberrima34.0610.6698.7278forward
CNT3099556Oryza glumipatulaOryza rufipogon72.9365.2390.42167forward
CNT30574713Oryza glumipatulaOryza barthii73.3648.5588.1168forward

Expression of CNT30369302

Peptides detected in this lncRNA

>peptide 1 (74 aa)
RPARRKRRMVEIAMVVGGNIFSGDISMLSQQSQGLAGCGGASPSLGRRMVVSPLPWAAARPARRKRRMVEEKDGG

Sequence

>CNT30369302
CGAGGCCGGCGAGGAGGAAGAGAAGGATGGTGGAAATAGCCATGGTGGTCGGCGGGAATATCTTTAGCGGGGACATCTCGATGTTGTCGCAGCAGTCCCA
GGGTTTGGCGGGCTGCGGTGGTGCGTCGCCTTCGCTGGGGAGACGGATGGTGGTGTCGCCGTTGCCGTGGGCGGCGGCGAGGCCGGCGAGGAGGAAGAGA
AGGATGGTGGAAGAGAAGGATGGTGGAAG