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Detailed information on CNT30369298


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690060Oryza glumipatulaOryza sativa5123.28100230forward
CNT30552389Oryza glumipatulaOryza glaberrima72.9510099.7329forward
CNT30574974Oryza glumipatulaOryza barthii75.8381.43100342forward
CNT30603466Oryza glumipatulaOryza punctata74.7288.9295.85337forward

Expression of CNT30369298

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MVVCSVVCIISIAQAAGSFREVKGRKKSSCSSTKLLALHKHRKRYDPLQTSSHAEGEWGEDLRRTSRWRS*

>peptide 2 (33 aa)
MILFRHLPTPKVNGVKILGGLHGGGVDDVDEFRL

Sequence

>CNT30369298
AGTTAGCCTGTTACTTGGAATCAATCATGGGGACCAAAAGATGCAAAAACCTTAAACCTCTCTAGACATTGCAGACCATAACTCAGAGAAACCAGAATTG
ATGCCTGATTCATCAGACTGATATGCCAGCAAGAATAGGTGAAGGGACCAGTGAAATCTGATCTGAAACTCACATGATAATAACTCACGACAAAAGGAGC
TAAACATTATTGGTATGGTAGTATGTTCAGTGGTGTGCATTATTAGCATTGCTCAAGCTGCAGGTAGCTTCAGGGAAGTGAAGGGGAGGAAAAAGAGTAG
CTGCTCCAGCACAAAACTACTAGCATTACATAAGCACAGAAAAAGGTATGATCCTCTTCAGACATCTTCCCACGCCGAAGGTGAATGGGGTGAAGATCTT
AGGCGGACTTCACGGTGGCGGAGTTGATGATGTCGATGAATTCAGGCTACA