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Detailed information on CNT30369160


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690536Oryza glumipatulaOryza sativa10069.296.64447forward
CNT30553284Oryza glumipatulaOryza glaberrima48.3243.8189.35216reverse complement
CNT30107943Oryza glumipatulaOryza longistaminata101.7949.1993.63455reverse complement
CNT30575904Oryza glumipatulaOryza barthii23.712.7591.51106reverse complement

Expression of CNT30369160

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVLLLRLGVHTDAILGIYPKGTVIHIAMSSTRARKK*

>peptide 2 (38 aa)
MERWALVKRKEVGTCIVVYKTVKAGTFHRCTAWSGRSSG

Sequence

>CNT30369160
TAATAATTAAGAGCTATAGGATTTCAACCATAAGTGCTCGTTCATAGTCTGGATTGCAGTTTTATGTAAAGCAAAAGAATTTTAAGAAGCAAACACCATA
TATATGACAACAGCTATTTACATTAGTGGCTATAATGCAGAGCTTCTAAACAAATGGTGTTGCTTCTAAGGCTGGGTGTGCATACTGATGCCATCCTGGG
CATATACCCAAAAGGGACAGTCATACATATAGCAATGTCATCCACACGTGCACGCAAAAAATAAGACATACCACATAGCATATATCCTGGCAGTTTAGGA
TGCACCCTAGAGAGAAGGAAAGGGGTTGATGGAGAGGTGGGCACTTGTCAAGAGGAAAGAGGTGGGTACTTGTATTGTTGTATACAAAACAGTCAAAGCA
GGCACATTTCACAGGTGTACTGCATGGAGTGGAAGAAGCAGTGGATC