Detailed information on CNT30368355


BLAST search results

BLAST vs Swiss-Prot:
sp|P00434|PERP7_BRARR, E-value = 8e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673938Sorghum bicolorSetaria viridis19.3645.4290.83109forward
CNT30183751Sorghum bicolorSecale cereale21.1413.5482.35119forward
CNT30307233Sorghum bicolorTriticum aestivum69.859.8287.79393forward
CNT30220972Sorghum bicolorHordeum vulgare14.7428.5284.3483forward
CNT30554242Sorghum bicolorOryza glaberrima28.9533.9688.96163forward
CNT30688208Sorghum bicolorTriticum urartu60.3989.0187.65340forward
CNT30348098Sorghum bicolorEragrostis tef70.6948.9587.19398forward
CNT30102121Sorghum bicolorOryza rufipogon45.8332.6689.15258forward
CNT30583621Sorghum bicolorEchinochloa crusgalli28.623.6481.99161forward

Expression of CNT30368355

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MRLPILIMAETKSAENWLALVLYCLTSASCDPPLKSSWSECSRPFCATRFW*

>peptide 2 (50 aa)
MVCAPDSAVMSRADRPWLPNILMSVARLWLAVRESFRPSGTLHVGPPSCIV

Sequence

>CNT30368355
AATAAACCTGCAGACCATGACGACCATGCATGGTTTTTAGTTCGTCTTCCTGCAGTTGAGCCTGACTTCCGTGGGCGTCCCTGACGACGGCATGAGGTTG
CCCATCTTGATCATGGCGGAGACGAAGTCCGCGGAGAACTGGTTGGCGTTGGTGCTGTACTGCCTGACCAGCGCGTCCTGCGACCCGCCATTGAAGAGCT
CCTGGTCCGAGTGCAGCAGGCCCTTCTGCGCCACCAGGTTCTGGTAGTAGGCGTTGTCGAAGCCGTCGGGCGTCTGCACGTCGAACGGCGCGAGCGTGGC
GTCGCCGCCGGAGCGCGGGCACGTCTTCTGCCGCAGCGCGGCGAAGCTGGCGTTGATGTTGCTCTCGGTGTAGATCCGGCTGCGGAAGAACTGGCACTGC
GACCTGCCGATGGTGTGCGCCCCCGACAGCGCCGTCATGTCGCGCGCCGACAGGCCCTGGTTGCCGAACATCCTGATGAGCGTGGCCAGGCTCTGGCTCG
CCGTCCGCGAGTCCTTCCGGCCCAGCGGCACGCTCCATGTCGGCCCTCCCAGCTGCATTGTTG