Detailed information on CNT30367377


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697771Sorghum bicolorOryza sativa15.4920.5689.3966forward
CNT30676068Sorghum bicolorSetaria viridis49.5359.688.15211forward
CNT30296814Sorghum bicolorTriticum aestivum15.7321.8288.0667forward

Expression of CNT30367377

Peptides detected in this lncRNA

>peptide 1 (81 aa)
DSASQFSTGNEQVVTYICLSFTVLTSINTTKMCLQRSSHYTNGTSFQQLMLNHPNRKFQTLAKISLRQKFPGTIKNINSKL*

>peptide 2 (32 aa)
MVPAFNSSCSTILTANFKLWLRFHSAKNFQVP*

Sequence

>CNT30367377
TGATAGTGCCTCCCAATTTTCAACAGGAAATGAACAGGTCGTAACATACATTTGTTTGTCCTTCACTGTTCTGACAAGTATTAATACAACCAAAATGTGT
CTACAAAGATCATCACACTATACAAATGGTACCAGCTTTCAACAGCTCATGCTCAACCATCCTAACCGCAAATTTCAAACTCTGGCTAAGATTTCACTCC
GCCAAAAATTTCCAGGTACCATAAAGAATATTAATTCCAAACTGTAATCATCTACAACTCCAAAGAAGTTCCACTTTTGCTTACACTTGGAACAATTCAG
ATCATCTAAGCTCTCTGCAAAAACAACTCAGTAGCTTCCCATTGGCGGCATCCCAAATGCTGGCATCGGACCAGGGCCCATTGGCGGCATTGGCGGAGCG
GGCAAAGCAAGAGGAAGCAGTTGGGC