Detailed information on CNT30366555


BLAST search results

BLAST vs Swiss-Prot:
sp|Q84UP7|CSLF6_ORYSJ, E-value = 4e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694854Sorghum bicolorOryza sativa31.4913.8186.4974forward
CNT30103008Sorghum bicolorOryza rufipogon65.1116.5482.35153forward

Expression of CNT30366555

Peptides detected in this lncRNA

>peptide 1 (70 aa)
SPLRWFSDGSTHVPSHWFPSAIHVALGSPSLSPLAALNASDLCLISCSMPCFRQKGTQTVANLAASAMAS*

>peptide 2 (77 aa)
VTLAVVLRWLNPCALPLVPVGHPRSSGLAVLKPPSGVKRVGPLLDIMLDAVLPAEGHPDGGELGGLRHGLVGEQHPGV

Sequence

>CNT30366555
GGTCACCCTTGCGGTGGTTCTCCGATGGCTCAACCCATGTGCCCTCCCACTGGTTCCCGTCGGCCATCCACGTAGCTCTGGGCTCGCCGTCCTTAAGCCC
CCTAGCGGCGTTAAACGCGTCGGACCTCTGCTTGATATCATGCTCGATGCCGTGCTTCCGGCAGAAGGGCACCCAGACGGTGGCGAACTTGGCGGCCTCC
GCCATGGCCTCGTAGGTGAGCAGCATCCCGGAGTC