Detailed information on CNT30366141


BLAST search results

BLAST vs Swiss-Prot:
sp|Q93VR4|ML423_ARATH, E-value = 2e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676593Sorghum bicolorSetaria viridis29.1536.5388.61202forward
CNT30524011Sorghum bicolorSetaria italica1426.9497.9497forward
CNT30289785Sorghum bicolorTriticum aestivum14.5727.5295.05101forward
CNT30436129Sorghum bicolorAegilops tauschii14.7232.2895.1102forward
CNT30244584Sorghum bicolorAvena sativa15.5829.7590.74108forward
CNT30151725Sorghum bicolorBrachypodium distachyon15.5837.8992.59108forward
CNT30576176Sorghum bicolorOryza barthii14.5730.2494.06101forward
CNT30116652Sorghum bicolorOryza nivara14.5728.4594.06101forward

Expression of CNT30366141

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MTSGSGTWSLALSNSMDQLTTAPASPSPSAAAALATFSVILKFL*

>peptide 2 (29 aa)
MDTIEPTNTTPATCTSSRRGRGTSWWRSP*

Sequence

>CNT30366141
AGAGAGTCCCAAGGTCCGAACTCTGAAGAGCGGCGGGCGTGAACACGGATAGCTTTATTGACGCGGGAGGAGGACCAGTGTGCAACGACACGTCGTCAGA
TGCACGACGACGCGGCGCCGCAGCAACATGAACCTCAGACGTACGAGGACACGGACCTTGGTAGCTACGTAGCTAGGTAGCAAATAGACCAGCATGGACA
CGATCGAACCAACCAACACCACACCAGCGACGTGCACTAGTAGTCGTCGAGGTCGTGGAACGTCTTGGTGGCGGTCTCCTTGATGACGTCCGGGTCGGGC
ACCTGGTCGTTGGCCTTGTCGAACTCCATGGACCAGTTGACGACGGCGCCGGCCTCACCCTCGCCCTCCGCCGCCGCCGCCTTGGCCACCTTCAGCGTGA
TCTTGAAGTTCTTGTAGAAGTCAACCAGCTCGCCGTCCACCACGCTGTACGACACCACCTTGTTCTCGTCGTCCGCCACCTCCAGCTTCTCCTTGGCGAA
CGTCAGCTGCTCGGGGAAGATCTTGGGGAACAGCTCCGTGGAGTCGCGCAGCGCCGCCCACAGCTTGTCCGCCGGGGACTTGACCTCCACCACCAGCTCA
ACCTTGGACGCCATTGCCGGCCGGCCTCTACCAACCTAGCTTCGTAGTGTAGGTGACTAGGCAGTGATGTGCCTGTGGTGGTGATCTGGCGAT