Detailed information on CNT30364692


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670550Sorghum bicolorSetaria viridis26.0229.1492.16153forward
CNT30519875Sorghum bicolorSetaria italica26.0223.1592.16153forward
CNT30139784Sorghum bicolorLolium perenne19.3921.0785.09114forward
CNT30369722Sorghum bicolorOryza glumipatula18.8821.8586.49111forward
CNT30100580Sorghum bicolorOryza rufipogon20.5826.8386.78121forward
CNT30575237Sorghum bicolorOryza barthii18.8825.5287.39111forward
CNT30584006Sorghum bicolorEchinochloa crusgalli24.3228.3292.31143forward
CNT30495763Sorghum bicolorDigitaria exilis25.6813.4190.73151forward
CNT30556352Sorghum bicolorPanicum hallii25.682193.38151forward

Expression of CNT30364692

Peptides detected in this lncRNA

>peptide 1 (99 aa)
MGTSPVGFAGAAADEEVATNVAGRDFLGPETSVEQKWNSFVRLAVRAESTGSMFTSIKLVVFALLLSGGSSYLCPQSRQIHVKMIPIGTTIKPFESITIF

Sequence

>CNT30364692
GGAGTGGATCCCATTCATTGACGCCACATAGGTCATCAACAGACTGCTCCAGGTTGTAATTGTTCTGCCTAAGGATTTCTTTGTTGAGATCGATCTGCCT
AAAGCCCATTTCCTCCAGCTCCCTCAGCAACTTCTCCTCATTGTGAACATCTAGGTCGGACAGCTCAGGAACCACGGCACTAACAGGTGGAGGCGCAGAT
ACTGGAGCTGACATAGGTATAGTTGTAGGCAGCACGGGCATAGGCACATTAACAGAGGGCACAAAAGCAGCAGCAGGTGCACTGGACATGGGAACATCAC
CGGTTGGGTTTGCAGGAGCTGCTGCAGACGAAGAGGTAGCAACCAACGTGGCAGGCAGAGATTTCTTGGGCCCAGAAACATCAGTTGAACAGAAATGGAA
CTCTTTTGTGCGTTTGGCAGTAAGGGCTGAGTCAACAGGCTCAATGTTCACATCAATTAAATTGGTTGTGTTTGCACTATTGCTCTCTGGAGGCAGTAGC
TATCTTTGCCCGCAGAGCAGACAAATTCATGTCAAAATGATTCCCATTGGCACAACCATAAAACCTTTTGAGAGTATCACCATATTTG