Detailed information on CNT30364409


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FGK8|SC16B_ARATH, E-value = 5e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694392Sorghum bicolorOryza sativa37.962.5786.54104forward
CNT30352122Sorghum bicolorEragrostis tef40.8832.8485.71112forward

Expression of CNT30364409

Peptides detected in this lncRNA

>peptide 1 (80 aa)
AENWFWLGGIGGIPRPPCSEEFEDFHSVTPLGAWFTLMGPFNLWSGIPFWKDGFVGGGGRGGSSAGTAAPSSTHRFNFSS*

>peptide 2 (55 aa)
MVYTHGAIQLMVWHTILERWFCWRWRKRRLLGRNSSTFFHPPLQLFIIVKFVLIP*

>peptide 3 (39 aa)
MVLLEVEEEEAPRQEQQHLLPPTASTFHHSKICSDPLILP

Sequence

>CNT30364409
GCAGAAAACTGGTTTTGGCTAGGTGGAATTGGAGGCATACCCAGACCTCCTTGCTCCGAAGAATTTGAGGATTTCCATTCTGTGACTCCATTGGGAGCAT
GGTTTACACTCATGGGGCCATTCAACTTATGGTCTGGCATACCATTCTGGAAAGATGGTTTTGTTGGAGGTGGAGGAAGAGGAGGCTCCTCGGCAGGAAC
AGCAGCACCTTCTTCCACCCACCGCTTCAACTTTTCATCATAGTAAAATTTGTTCTGATCCCCTAATTTTGCCT