Detailed information on CNT30364315


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521774Sorghum bicolorSetaria italica25.943.1689.1683forward
CNT30577459Sorghum bicolorOryza barthii24.0614.9587.0177forward

Expression of CNT30364315

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MPAAMPFMVRISVSSRPGAYSLCCRSCASIDWCRSGIAVAAAANPNESKSKFPPGGTDDLLPPASPQRAGGRGKRRVVARLSAGGGGG

>peptide 2 (99 aa)
HRIRRVICTPRIWPSRYSACRQRCPSWSGSVCPPGLARTRSAAAAARRSTGAAPASRSRRQRIRTNQNQNSRPEGQTISSLPRARSGRAGVGRGEWWLV*

Sequence

>CNT30364315
CATAGGATAAGACGGGTTATTTGTACACCGAGGATCTGGCCTAGCCGGTATTCTGCATGCCGGCAGCGATGCCCTTCATGGTCAGGATCAGTGTGTCCTC
CAGGCCTGGCGCGTACTCGCTCTGCTGCCGCAGCTGCGCGTCGATCGACTGGTGCCGCTCCGGCATCGCGGTCGCGGCGGCAGCGAATCCGAACGAATCA
AAATCAAAATTCCCGCCCGGAGGGACAGACGATCTCCTCCCTCCCGCGAGCCCGCAGCGGGCGGGCGGGCGTGGGAAGAGGAGAGTGGTGGCTCGTCTGA
GCGCGGGCGGCGGCGGCGGC