Detailed information on CNT30363895


BLAST search results

BLAST vs Swiss-Prot:
sp|P49120|H2B4_MAIZE, E-value = 7e-32

BLAST vs NONCODE:
NONORUT000045, E-value = 2e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670544Sorghum bicolorSetaria viridis61.6883.5191.36243forward
CNT30618876Sorghum bicolorSesamum indicum24.876.0384.6998forward
CNT30630561Sorghum bicolorVigna unguiculata18.2730.3886.1172forward
CNT30186107Sorghum bicolorSecale cereale52.7948.687.02208forward
CNT30231835Sorghum bicolorAnanas comosus22.8413.8597.7890forward
CNT30355733Sorghum bicolorLactuca sativa18.2728.9288.8972forward
CNT30369782Sorghum bicolorOryza glumipatula94.1658.2483.83371forward

Expression of CNT30363895

Peptides detected in this lncRNA

>peptide 1 (56 aa)
EVNLVTALVPSETACLASSPGRTRRTDVWISLEFMMDMALEEMPMSGCTCLSTLKM*

Sequence

>CNT30363895
TGAGGTGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGCACCGACGTCTGGATCTCCCTGGAG
TTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCAGGGTGCACCTGCTTGAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCACCGACTTCTTGG
CCTTCTTCTTCCCCTTCTTGTCGCCGCCTTCCTTGCCGGCCGACTTGCCCGCCGGGAGGCGCTTCTCCGCCTTGGGCTTCTTCCCCGCCGGGGCCTTCTC
GGCCGCGGGCTCCTCCTCCGCCGCGGGCTTCTTCGCCGCCGGCTTCTTCTCCGCCTTGGGAGCCATCGATGCGGCTCCTGGGGTTTCGCGGTGG