Detailed information on CNT30361992


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522471Sorghum bicolorSetaria italica40.6927.4191.55142forward
CNT30381182Sorghum bicolorManihot esculenta20.0617.6387.1470forward
CNT30123402Sorghum bicolorPhyscomitrium patens22.359.785.978forward
CNT30330803Sorghum bicolorDioscorea rotundata20.0611.3387.1470forward

Expression of CNT30361992

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MLRTPCTRRSRGCPCRSPPEGHGGTRPAASGHPCTSALSSWSPSRF

>peptide 2 (51 aa)
TGVPTGNDRKAEACTSSVITYTTHRKRHIFVYVSFGESVYSILYRKNTRQS*

Sequence

>CNT30361992
TTACAGGAGTCCCAACAGGAAATGATCGAAAAGCGGAAGCCTGTACGAGTTCAGTGATTACATACACAACTCATAGAAAACGGCACATTTTCGTCTACGT
CTCTTTCGGCGAATCTGTATATAGTATTCTCTATCGAAAGAACACGAGGCAAAGCTAGTGAATTTTCTGAGCACACGGCGGCCCCTGGCCTACAACAAGG
GGGCCTCATCATGCTTCGTACACCTTGCACTCGTCGGTCTCGGGGTTGTCCTTGCAGAAGTCCTCCAGAGGGTCACGGTGGGACGCGTCCAGCAGCCTCT
GGTCACCCGTGTACGAGTGCGTTGTCGTCATGGTCCCCTTCACGATTCC