Detailed information on CNT30361414


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696621Sorghum bicolorOryza sativa62.524.4583.4235forward
CNT30283765Sorghum bicolorTriticum aestivum30.3225.583.33114forward
CNT30596968Sorghum bicolorOryza meridionalis62.551.8882.98235forward
CNT30103572Sorghum bicolorOryza rufipogon62.522.0783.4235forward
CNT30577940Sorghum bicolorOryza barthii62.529.0183.4235forward

Expression of CNT30361414

Peptides detected in this lncRNA

>peptide 1 (74 aa)
GITSKHRASTRIFSFRKVVYRICIRRITRCTFVWSWSSIWWIVGRPSIWIISRSSIWWIVGRPSIWWIVGRPSI*

Sequence

>CNT30361414
GGCATTACTAGTAAACATAGGGCTTCCACTAGGATATTCTCTTTTAGAAAAGTAGTCTACAGGATATGCATCAGAAGGATCACGAGGTGCACTTTCGTTT
GGTCTTGGTCGTCCATATGGTGGATTGTTGGTAGGCCTTCCATATGGATCATTAGCAGGTCTTCCATATGGTGGATCGTTGGCAGGCCTTCCATATGGTG
GATCGTTGGCAGGCCCTCCATATAGTGTCGATTTTCTGCTAGGCATATCAACAGGAGGATCATCGAAAGGGGCAAAAGGTGGAGGATTATTGGCAGTACT
TGTAACTCCCAAAGTCCTATTTCTAAGCCTCGAAGCAATCTCTGTGAGGGCTCCTCTTGCAATAGCTGGAGGCCCA