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Detailed information on CNT30357505


BLAST search results

BLAST vs Swiss-Prot:
sp|P19866|G3PA_SPIOL, E-value = 5e-62

BLAST vs NONCODE:
NONMTRT001777, E-value = 8e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676092Lactuca sativaSetaria viridis14.3932.0983.1695forward
CNT30698911Lactuca sativaQuercus lobata16.6740.8986.36110forward
CNT30371585Lactuca sativaArabidopsis thaliana17.8830.1888.14118forward
CNT30268339Lactuca sativaChenopodium quinoa49.3940.0580.67326forward
CNT30729008Lactuca sativaCorchorus capsularis17.2721.3989.47114forward
CNT30381182Lactuca sativaManihot esculenta13.1821.9193.187forward
CNT30524759Lactuca sativaPhaseolus vulgaris63.6434.3480.95420forward
CNT30628637Lactuca sativaVigna unguiculata25.7619.8487.65170forward
CNT30196808Lactuca sativaPisum sativum7.5821.19050forward
CNT30712687Lactuca sativaGlycine max66.5253.8780.87439forward
CNT30123402Lactuca sativaPhyscomitrium patens22.8818.7882.78151forward
CNT30146657Lactuca sativaMedicago truncatula65.4539.3881.94432forward
CNT30243463Lactuca sativaAvena sativa25.331.9380.84167forward
CNT30215929Lactuca sativaHelianthus annuus35.324.7189.27233forward
CNT30680437Lactuca sativaTriticum urartu24.3930.981.99161forward
CNT30346859Lactuca sativaEragrostis tef17.5826.2481.03116forward
CNT30622203Lactuca sativaCajanus cajan61.2146.9283.66404forward
CNT30572796Lactuca sativaVitis vinifera25.331.6384.43167forward
CNT30726333Lactuca sativaLupinus angustifolius26.8232.1884.75177forward

Expression of CNT30357505

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MLGRCSVLQLLHVGGHGGWRGVADDRVRMAVKFGVDSDDISRNVTFSRRSD*

>peptide 2 (49 aa)
EMVTIKRLNERIERLTPSYLQQCQPNPPPFASNPIRYRTMQSPSPCHLP*

>peptide 3 (59 aa)
MSSPITMVNDESTVDDTSLHLKSTDTRGSSHTARIPANSLSAASLNAALTSSAKVFLET*

>peptide 4 (51 aa)
MKGSRGSLPVICNNVSQIHHPLRVTPFVIVPCNHLHHVISHNHGQRRVNSR*

Sequence

>CNT30357505
GAAATGGTAACAATTAAACGATTGAATGAAAGGATCGAGAGGCTCACTCCCAGTTATTTGCAACAATGTCAGCCAAATCCACCACCCTTTGCGAGTAACC
CCATTCGTTATCGTACCATGCAATCACCTTCACCATGTCATCTCCCATAACCATGGTCAACGACGAGTCAACAGTCGATGACACGTCGCTGCATCTAAAG
TCAACAGACACCAGAGGCTCGTCGCACACCGCCAGAATACCAGCCAACTCATTGTCAGCAGCCTCCCTGAACGCCGCGTTGACCTCCTCAGCGAAGGTCT
TCTTGGAAACCTGAACCACCAAGTCCACGACGGAGACATTGGGTGTGGGCACACGGAGAGCAATACCGTTGAGCTTCCCTTTGAGTGACGGCAACACAAG
CGCGACGGCCTTTGCTGCTCCGGTGGATGTTGGGACGATGTTCAGTGCTGCAGCTCTTGCACGTCGGAGGTCACGGTGGCTGGCGAGGCGTTGCTGATGA
TCGTGTCCGAATGGCTGTAAAGTTCGGCGTTGACTCCGACGACATAAGTAGGAATGTCACCTTTTCCCGGCGCAGTGATTAGAACCTTCTTGGCTCCGGC
CTGAAGGTGCTTCCCAGCTCCATCTCTGTCGACAAAAACTCCGGTTCCTTCGATCACCAA