Detailed information on CNT30357074


BLAST search results

BLAST vs Swiss-Prot:
sp|P19866|G3PA_SPIOL, E-value = 1e-39

BLAST vs NONCODE:
NONMTRT001777, E-value = 9e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676663Lactuca sativaSetaria viridis17.7923.8783.1695forward
CNT3088037Lactuca sativaVigna radiata21.168.4189.38113forward
CNT30681694Lactuca sativaTriticum urartu13.331.9890.1471forward
CNT3065586Lactuca sativaSelaginella moellendorffii20.224583.33108forward

Expression of CNT30357074

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MSSPITMVNDESTVDDTSLHLKSTDTRGSSHTARIPANSLSAASLNAALTSSAKVFLET*

>peptide 2 (51 aa)
MKGSRGSLPVICNNVSQIHHPLRVTPFVIVPCNHLHHVISHNHGQRRVNSR*

>peptide 3 (48 aa)
MVTIKRLNERIERLTPSYLQQCQPNPPPFASNPIRYRTMQSPSPCHLP*

Sequence

>CNT30357074
CAAAAATGTAGATAACTTGAAAAGAAATGGTAACAATTAAACGATTGAATGAAAGGATCGAGAGGCTCACTCCCAGTTATTTGCAACAATGTCAGCCAAA
TCCACCACCCTTTGCGAGTAACCCCATTCGTTATCGTACCATGCAATCACCTTCACCATGTCATCTCCCATAACCATGGTCAACGACGAGTCAACAGTCG
ATGACACGTCGCTGCATCTAAAGTCAACAGACACCAGAGGCTCGTCGCACACCGCCAGAATACCAGCCAACTCATTGTCAGCAGCCTCCCTGAACGCCGC
GTTGACCTCCTCAGCGAAGGTCTTCTTGGAAACCTGAACCACCAAGTCCACGACGGAGACATTGGGAGCGAGGCAGTTGGTGGTGCAGGAGGCGTTGCTG
ATGATCGTGTCCGAATGGCTGTAAAGTTCGGCGTTGACTCCGACGACATAAGTAGGAATGTCACCTTTTCCCGGCGCAGTGATTAGAACCTTCTTGGCTC
CGAGAAGCATTGGCCATGGAGAAGGCTGTAGAAG