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Detailed information on CNT30355286


BLAST search results

BLAST vs Swiss-Prot:
sp|P85194|PSBO_HELAN, E-value = 2e-87

BLAST vs NONCODE:
NONTCAT000011, E-value = 6e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675069Lactuca sativaSetaria viridis31.9665.3281.96194forward
CNT30547255Lactuca sativaIpomoea triloba42.835082.31260forward
CNT30515312Lactuca sativaJuglans regia29.6511.5186.11180forward
CNT30727933Lactuca sativaCorchorus capsularis52.2221.283.6317forward
CNT30196966Lactuca sativaPisum sativum9.5624.1787.9358forward
CNT30710612Lactuca sativaGlycine max50.2529.5581.64305forward
CNT3042430Lactuca sativaPrunus dulcis38.0621.2180.52231forward
CNT30289153Lactuca sativaTriticum aestivum26.0324.280.38158forward
CNT30242448Lactuca sativaAvena sativa28.0131.8981.18170forward
CNT30659249Lactuca sativaTriticum dicoccoides34.9320.5279.72212forward
CNT30614251Lactuca sativaArabis alpina15.4933.184.0494forward
CNT309111Lactuca sativaZea mays35.4229.2980.93215forward
CNT30348024Lactuca sativaEragrostis tef35.4234.8581.4215forward
CNT30368337Lactuca sativaSorghum bicolor45.341.3579.64275forward
CNT30704492Lactuca sativaPrunus avium54.0434.9380.18328forward
CNT30584058Lactuca sativaEchinochloa crusgalli44.3221.2580.3269forward

Expression of CNT30355286

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MSLVFWNSGVEFLLTPSALTVNDVGSKQNFLAL*

>peptide 2 (60 aa)
EHKIRIKKTNKNKYIELISLQLSIPNTLNFNIFRDFCTQISIGGLNALKHSDHFTGVRFG*

Sequence

>CNT30355286
TGAGCACAAAATCAGAATCAAGAAAACAAATAAAAACAAATACATTGAGTTAATATCACTCCAACTGAGCATACCAAACACCTTGAATTTTAACATCTTT
AGGGACTTTTGCACCCAAATCAGTATCGGAGGGCTGAATGCTCTCAAACACTCCGATCACTTCACCGGTGTCAGGTTTGGTTGAGAAACGAAGACCCTCT
GTACGACGGGACTAGAAATTCCCCACCGAAGCTTTCCGGTTTACCGGAGGCGACAAGTTGTTTGATCGTGAACAGGAATGGCACACGCTCACCTCCAGGA
AGCTGAACAGTGACGGCAGCATAGTCGATTCCGTCTTTCTCTTCGAATTTGATGGTGCCATCGGAGGATACTTCGAGAGGTCCCTCGATTTCATCGAGGG
TGTAGGTCAATCGGGTCATGAGTTTGGTTTTTTGGAACTCCGGTGTGGAGTTCTTGCTAACGCCCTCGGCTTTGACAGTGAACGACGTCGGCTCTAAGCA
AAATTTCTTGGCGTTGTAATTGCCTGGTTTGACGGCGAAGCCGTCGACTCCGCCTTCAATGGTTGGGCACTGGTTAGCGGTGCCTGGCTTCCTTCGGCGC
TTGCTCC