Detailed information on CNT30355146


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375520Lactuca sativaArabidopsis thaliana20.2219.0192.5954forward
CNT30510004Lactuca sativaSolanum lycopersicum46.0740.3384.55123forward

Expression of CNT30355146

Peptides detected in this lncRNA

>peptide 1 (50 aa)
SSSCQQHRLRLPWGASSRPLASSQQGLSQLVSSPPLASSQPASSLPLAPL*

>peptide 2 (55 aa)
LLLVNSTGSGFLGELLPGLWLLLSRGFLSWFLLLHWLLLSRLLLCLWRHCRDFGL*

>peptide 3 (61 aa)
FFLSTAPAPASLGSFFPAFGFFSAGAFSAGFFSSTGFFSAGFFSAFGAIVGTLVCKERVMF*

Sequence

>CNT30355146
TCTTCTTCTTGTCAACAGCACCGGCTCCGGCTTCCTTGGGGAGCTTCTTCCCGGCCTTTGGCTTCTTCTCAGCAGGGGCTTTCTCAGCTGGTTTCTTCTC
CTCCACTGGCTTCTTCTCAGCCGGCTTCTTCTCTGCCTTTGGCGCCATTGTAGGGACTTTGGTTTGTAAAGAAAGAGTGATGTTCTAAAAAGAGAGAGAT
GATTGTTGTTCGTTCAGGGGCTTTCTCAGCTGGTTTCTTCTCCTCCACTGGCTTCTTCTCAGCCGGC