Detailed information on CNT30352122


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FGK8|SC16B_ARATH, E-value = 1e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694392Eragrostis tefOryza sativa91.57.7183.97312forward
CNT30461490Eragrostis tefSaccharum spontaneum32.843.8785.71112forward
CNT30364409Eragrostis tefSorghum bicolor32.8440.8885.71112forward

Expression of CNT30352122

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MGGIPELSSEGLEVLASANPLAVWPPTGPFKL*

>peptide 2 (40 aa)
MKLSLEVGEGEAPQQGPRHLPPPIASASRHSRICSVPLALP

Sequence

>CNT30352122
CCTGTCATTATCGAAAGAAATCAGGGAAAACAGCTAAACAAATTACCTTGATCTAACACCCATCCGTCCACGCGCTGAGAATTGGTTCTGGGTGGGTGGT
ATGGGTGGCATCCCCGAACTAAGCTCAGAAGGGTTAGAGGTTTTAGCATCTGCAAATCCATTAGCAGTATGGCCACCAACAGGGCCATTCAAGTTGTAAT
CTGGGACACTGTTCTGAGATGAAGCTTTCGTTGGAGGTGGGGGAAGGGGAGGCTCCTCAGCAGGGACCTCGGCACCTTCCTCCACCCATCGCTTCAGCTT
CTCGTCATAGTAGAATTTGTTCTGTTCCCCTAGCTTTGCCT