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Detailed information on CNT30351417


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694735Eragrostis tefOryza sativa54.8814.991.53118forward
CNT30520717Eragrostis tefSetaria italica96.7428.4989.9208forward
CNT30179895Eragrostis tefSecale cereale88.3771.4388.95190forward
CNT30290295Eragrostis tefTriticum aestivum54.8818.1890.68118forward
CNT30385644Eragrostis tefTriticum turgidum54.8815.1191.53118forward
CNT30554363Eragrostis tefOryza glaberrima54.884.9191.53118forward
CNT30659718Eragrostis tefTriticum dicoccoides54.8817.3590.68118forward
CNT30453977Eragrostis tefSaccharum spontaneum54.8839.8694.07118forward
CNT303454Eragrostis tefZea mays90.2376.3893.3194forward
CNT30680164Eragrostis tefTriticum urartu54.8818.1391.53118forward
CNT30362913Eragrostis tefSorghum bicolor93.4971.7993.03201forward
CNT30370617Eragrostis tefOryza glumipatula54.8842.9191.53118forward
CNT30148624Eragrostis tefBrachypodium distachyon54.8828.190.68118forward
CNT30581445Eragrostis tefEchinochloa crusgalli54.8817.0597.46118forward
CNT30496379Eragrostis tefDigitaria exilis54.8827.3197.46118forward
CNT30117138Eragrostis tefOryza nivara54.889.8191.53118forward

Expression of CNT30351417

Peptides detected in this lncRNA

>peptide 1 (70 aa)
GELTSSMVLKSLPVSSLRLFFSSLGLEAMTVLRSFMTYGHAFLSMSGLRLMMSCADCLALAAASAGGSGCR

>peptide 2 (70 aa)
WGAYVVNGVEELAGELLEALLLVLGLGGDDGLEVVHDVRPRLLVDERLEVDDVLRRLLGPRRGLRRRQRLQ

Sequence

>CNT30351417
TTGGGGAGCTTACGTCGTCAATGGTGTTGAAGAGCTTGCCGGTGAGCTCCTTGAGGCTCTTCTTCTCGTCCTTGGGCTTGGAGGCGATGACGGTCTTGAG
GTCGTTCATGACGTACGGCCACGCCTTCTTGTCGATGAGCGGCTTGAGGTTGATGATGTCCTGCGCCGACTGCTTGGCCCTCGCCGCGGCCTCCGCCGGC
GGCAGCGGCTGCAGG