Detailed information on CNT3035080


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03227|COX3_VICFA, E-value = 1e-125

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30197849Cucumis meloPisum sativum9.6269.3894.43503forward
CNT30494334Cucumis meloOlea europaea1.9921.6291.35104reverse complement
CNT30442188Cucumis meloAegilops tauschii4.9978.1493.87261forward
CNT3081767Cucumis meloBrassica juncea1.9126.3994100reverse complement
CNT30687283Cucumis meloTriticum urartu13.0646.7294.88683forward
CNT30481824Cucumis meloChara braunii1.7830.187.193forward

Expression of CNT3035080

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNEYEFSLWNSSSVLLVTFFIESSTPLLISRASI*

>peptide 2 (29 aa)
MIRTFANSLRLTFVSFQSSYFITGGRTLD*

>peptide 3 (34 aa)
MVWILPRSGAFSSRSGGSKNLSEKAPVRKNGESL*

>peptide 4 (37 aa)
MGSLELPLTAFLFLSLFLTLPLRFLSLSFLLFLPFLN*

>peptide 5 (39 aa)
MIEVNWTLVYPQVNMSLSMRRSKNIEKRLNRSAGAVRRL*

>peptide 6 (51 aa)
MKLRRLSRSSLIFFFPLRLLPYFLDYLLKYPIILLLSSSLLSVDSRTRESL*

>peptide 7 (37 aa)
MDINKSFGRVQRILNGILAFFSQCRCIKDGRGPKVMK*

>peptide 8 (38 aa)
MELKLTELSFHSSFIFFLWYGFFRGVGLSLVGLEAQRI*

Sequence

>CNT3035080
AGCCAGTTGCTAAGAAAAAGGTAGAACCATAAATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCTGTGAATACTAGAGC
CAATGAAACGATAGCTACTAAAGCGTAAACATATCGTTTTTCCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACAGCTGCTCCGGATGAAAGGAGA
ATAAGGGTATTAAGAAAAGGGATTTCCCGAGGATCTAAAACCCCAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGTAGGTGCCAAAGAAGAAT
GAGAAGAAGCCCGAAAAAAAGCAAAAAGGAACATAACCTCCGATACGATAAAGAGAAGAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATG
TCCTTCCAACGTGGATTCACGTAGAACATCGCGCCACCATACGAACATGGTATATAGGAGAAATATGAGGCCCAAACTGAGAAGTCTTGCACCCCCTTGA
AATGAGTGCATGTACATCACACCTCCTACGGTGGTTGCCAAAGCTCCGAGTGAACCCGAAATAGGCCATGGACTTGGATCTACCAAATGATAAGAATGCC
TCTGAGATTCAATCATAAACCACTTTGCCTCGGTTGTATGTAAACCCCCCCTTCACCCCCACCCGCTAAAGTGGTAAAGAAGGGCTCTTTGGGGTCTCAT
TTTCTTTCTATCTGACAGGACTCAAAAATAGGAAGGGATGGTTCTTTCATTGCATTGATAGAAGTCTAACTAGAAAAAGATCTCGTTGCTTTGACCGAGC
CAAGGCATCCTTAATCTTGAAAGCCTTTCTTATGACTGATTTATGGCGTAGAAGGCTTTTAGTGGTCTCATTGAGAATAAAGTCAAAGACTTTGCGAACT
CTTAGATGAAACTACGGAGGCTGAGTAGGAGCAGTCTGATCTTCTTCTTCCCGCTCCGTCTTCTTCCATATTTTCTTGATTATCTACTCAAATATCCGAT
TATTCTACTATTATCATCAAGCCTACTTTCAGTGGATAGTCGGACTCGGGAAAGCCTATAATATAAGAAGAAGACAAGTCCCCACGTCTTTGATTTGAGT
CGCTCCGCTTCGCGCCTTCGGAGGCGTAGTGCTTTCTTTATTGGGCTTTATAGTAATCCTTCAGTTTCTTCTTGGCATCAAAATAGATCAATGAAAGAGG
AAAAAAGAATTTGAGAAAAGAGAAAGCCTATGATTATACTAAAGAGAAAGCCTATGATTATACTGACGGCTTTCCTTCCCAACAAATCTTCGTTCTTAGT
TATTTGATTCCACTTTCAAACTGAATATATATTCCAGGTTTCCTTGTTCATTGAGGCGGTGCAACCGTCTCTTTCTTTATGTCAAATTCTCCTCGCATAT
TTCATTGCGCCTCTATCTTCATTGGTTCTACGTAGCTTAATTAGTCCGAAGGCTCGACTGAAAGGAGTCCAAGATTCAAGCTGAAAGGTGCGAAGGTACT
CGTAGTTTTAGATATAGGGAAGGCGCAAAGAATTTGCGAAAGAGAGAGAAGAAAGATGAGATTTTTTTGAACTTTCTGGGAGTCTTCTGCCTTGCGGAGT
AGGTTCAGGAGAACCCGCTAAAGAAGCAGAGCGGAGGCATCCAAATTCAATTCCTCTTCCTTTAAGCCCTAATTCATTAATATGGATTTCTCAAATTCTT
TGAGCCTTTGAATAATAATGATAAGGACTTTCGCAAATTCTTTGCGCCTAACCTTTGTATCCTTTCAGTCGAGTTATTTCATAACCGGAGGACGGACCCT
TGATTGAATATTTCAGAAATCCATATGAATCTGAAAGGTGCGAAGCAGCTCGACTAAGAAGGAGAGGTGAGAATGAGAAGCCCTCAAGAAAAAAGAAAGA
CTTATCCCTGAAAAGGAGTGCAACGAAGTGAATAAAGGGTGAAAAGAATATTGAAGAACAAGGGGTCATGAAATTCAACAAAAGGATATATGGAATAGTC
CTCCGGACCCGTCTCATTGATAAGGGCTAAGTCAAAGATGGAACTAGAAGAATATTGAGAATTTGAGGCTCGACTGAAAGGAGAGGGGGGGAGAGGGGGG
GTTCAAAGAGAGAAGCGACTGATCGATGTTGTTGTCAGATTCCTTTCATCTTTAGATATTATGTCCACTTAAATGTTGTTGGATAGGCTTTCCCTTTATG
GAACTGAAACTGACTGAACTTTCCTTTCATTCTTCCTTTATCTTTTTTTTATGGTATGGATTCTTCCGCGGAGTGGGGCTTTCTCTAGTAGGTCTGGAGG
CTCAAAGAATTTGAGTGAGAAGGCTCCGGTAAGAAAAAATGGGGAGTCCTTATGAAACTTATCCGGAAACTTCTAACTTCAAACCTTGAATATTCAACCT
TGAAAAGAAGGTAAAGGAGGGAGCGGACTACGGAGGCCTTTTAGTGGAATCTTTTCCGAAAAAAGAGGTCCGACCGCTAAGTGGGAATATATAGGATGAA
AGTAGCGGAGCAGTCTTGTCTCCCTGCTTTCCCCGGGTAGTGGTAGTTTCATTCTTCTTCATTTCTTTTCTTCTATCTCCCACTCCGCGGTTGAATATGA
AAGGCAGTCCCACGGAGCGGGATAATCAAGAAGAAAGCTCCGGATAATTAAGCTACGGAGGACCAAAGAATTTGCGAAGAAAAAGATCTTTTTTATCTAA
AAGACGGAGGCAATAAAAAGTTCATATGGTAGATTGAAGAGGACTGAGGGCTCGAAATGAAAGACGTTCGGACGCTCCGTAGGAGTTGAGAAAGAATGAT
CGAGGTCAACTGGACCCTTGTTTATCCACAGGTTAATATGTCCTTATCAATGAGACGCTCAAAGAATATTGAGAAGCGACTTAACAGGAGTGCTGGAGCG
GTCCGAAGGTTATGAAATAACGAGACTGAAAGGTGCGAAGGTACTCGTAGTTTGAAATAGAGCGAAGGTACTCGTAGTTTGAAATATAGGTTCAGAGCGA
AGGTACTCGTAGTTTGAAATATAGGTTCAGAGCGGTTAGGCGCAAAGAATTTGTGTGCTCCTTCAATTCTTTTCGAATTCCACTAGACTTGAAAACAAAG
GCTGAATTCAAGCTAATATGGATATAAACAAGTCCTTCGGACGGGTTCAAAGAATATTGAATGGAATATTAGCTTTCTTTTCACAATGTAGATGTATCAA
AGATGGAAGAGGTCCGAAGGTTATGAAATAACGAGACTGAAAGGTGCGAAGCAGCTCGACTAAGAAGGAGTCAATGAACAAGGCTCGACTGAAAGGAGAG
AGAATTTGAGAAAGACTGATCCCTATTCAAAGGCTTGAAGGAGTGCAAGTCAGAACCATTATAGATAGTCCTTCGGACCACAGGTTAATATGGATTTCAG
ACTCCTAAAAAATCAGTCAATGAACAAGGCGCAAAGAATTTGCGAACAAGGGCTCGACTGAAAGGAGAGGCAGAACCTGGACCTTTGTTTTTCCACAGGA
CTTCGGACCACTCAAACTTATGGGGAGCCTTGAACTTCCTTTAACAGCTTTCCTATTCCTTTCACTTTTTCTGACTTTACCGCTCCGTTTTCTTTCATTA
TCTTTTCTTCTTTTTCTTCCATTCCTTAATTAAACTACTTCTACCTCTTCTGTTTTAGTAGGCTCTCTTCTTTTTCAGACGAAGGATTCTCCCGCTCCGT
GGGGTCTTGGACGAGGATTCTCCCAAGAACCTACTTAAAGGAAGAAAGCCTATCCTGAGACTGAATACGAGAAACTGAAAGGAGAAAGCCTATGATTTTC
AGCAAGCATTTTTGTAAAGTAACAATTCTCTTCAGTTTGGTTTCGGAAAACTTGTTGGTCGCGGATTAGTGCGTTCTGCGCCGCCCGGCGGCCACATAGA
ATTGAGAAAAGCCTATGGTTGAGGCAGCATGAATTTATGAAACTTGACACGTGGGAAGGGATGACTCTTTCTATTCAAACCTGTAAACATAGAAGACCGC
CTCAATGAACAAGGGATCATTCACATAGAATAGTTATTCACAACGAGAAAGGCTCAAAGGATTTGAGAAGGAAGAGGCTCCGTAGGAGTTGAGATGAACA
AGGTCTCGACTGAAAGGAGAGAAACTGCACTTATGAGTCTTTCAGTTACCTTTCTGCCTCTTTAAAGAGAGTTCAAGGTTTTCTATTATCGGAAGAAGAA
GAAGAAGAAAATAGAGGCGCAAAGAATTTGCGAATAAAGGCTAAAAAAAGTGAAGACGAGACTGCTCCGTTAGGAGTCTGAAACCGGAGGACTTGTTCAT
TCCACTAATATTGTCTCATTGATAAGGGCTAATAGATTTGACGAGGGCTCGTAGATAAATTCAGGTGCGAAGCAGCTCGACTAAGAAGGAGAGGAGAGGC
ATTTCTCTAAGAAAAGAAGAGAAAACGAGTCCTTCGCAAATTCTTTGCGCCTAACGGAGGGAGTGCAACGAAAGAATTCCACTAATATTGTCCTTTTGAC
CTCTGAAATATGGAGAAAGAAAAAGCTCCAGATGATCAAAGCATTTGAGAAGAATTTGAGACTCGACTGCTCCGAAGGAGTCTGAAATCCATATTAACCT
GTGGAATATACTCAACTCAAAAGGAGGTTATGAAATAGCTCGACTCCCACGGGGCGGTTCGAAGAAAGTCGACTGATAAGGAGTCAATGAACAAGGAATT
TCATAAAGAAAGCGAAAGGACTGTATTATAAGATTTTCAGGAGCCCTTAAAATTAGGAAAGAAGAATCGACTGAAAATTCTTTGAACCTCTCCTATTCTT
TGAGTTCCATCTTTTCTACATCTACATTGTGAAAATCAAGCTAATATATATGGAAGTGCCCGCCTTTGTTCATTGACAAATTCTTTGAGCCTTTGTTTTT
AGCCGAAGGACTTTTTTGAGTGACTTTATGATCTTTGAGCTCTTTATTCAATGATCGTCTAGTGGAATGAACGAATATGAATTCAGCCTCTGGAACTCGT
CCTCCGTCCTATTAGTGACTTTCTTTATTGAAAGCTCAACTCCTCTCCTTATCAGTCGAGCCTCTATCTGAATTTAGGTCTCGTCTTCTTTCTTTTATTG
CATTTCTTCATTTCATCCTTAGGCTTTCTGGAGGCATCAATCTCGTTCATTGATAGTACTCCTTCGGATTCCGCTGCCCGGTCCGTCCTAGCTTAATTAG
AGGGTAGTGCTTTCTTGATTATCCCGGTC