Detailed information on CNT30348949


BLAST search results

BLAST vs Swiss-Prot:
sp|A5H454|PER66_MAIZE, E-value = 2e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694715Eragrostis tefOryza sativa54.2511.5887.83115forward
CNT30178931Eragrostis tefSecale cereale5016.6987.74106forward
CNT30659540Eragrostis tefTriticum dicoccoides27.8316.5386.4459forward
CNT30680601Eragrostis tefTriticum urartu32.5519.8386.9669forward

Expression of CNT30348949

Peptides detected in this lncRNA

>peptide 1 (36 aa)
VGAAAVEELLVRVQEALLGEQVVVVRVVECVGRRGV*

Sequence

>CNT30348949
GTCGGTGCTGCCGCCGTTGAAGAGCTCCTGGTCCGAGTGCAGGAGGCCCTTTTGGGAGAGCAGGTTGTTGTAGTACGCGTTGTCGAATGTGTTGGGCGTC
GTGGTGTCTAGCGGCGCCAGGTTGGTGTTTCCGTTGGGGGATGCCGCGGGGCAGTTTGCCTTGAGCGACGTCGCGAACGTCGAGTTGATGTTCGTGTCGT
TGTAGATGTGGG