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Detailed information on CNT30346253


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6AVI0|RSLE2_ORYSJ, E-value = 3e-134

BLAST vs NONCODE:
NONORUT003941, E-value = 1e-133

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596250Eragrostis tefOryza meridionalis83.9525.6485.71518forward
CNT30497727Eragrostis tefDigitaria exilis5987.588.74364forward

Expression of CNT30346253

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MQSNLSKLLFTGRRSFNKLYALADIVDDTVN*

>peptide 2 (40 aa)
PVLVKSLMHIFGYATENGILMSFGVSKLQLKFPCFMEKDI*

Sequence

>CNT30346253
TTCCAGTACTTGTCAAATCTCTCATGCATATCTTTGGCTATGCTACTGAAAATGGGATCTTGATGTCCTTTGGCGTTAGCAAGCTCCAGCTGAAGTTTCC
ATGCTTCATGGAAAAAGATATTTGAAGTTGGGTTGGCAGCAGCCATGATGCTATGTGCAGAGTCATGGAGCAGATTCAGGTAACTACAAGCTGCCTCAAC
TCTCTTCCAGTCCTCTGCTGAAGGGGCTTCATTGTAATTATCATCATGTGTCTCTAGTGTAGTAAATGCCTGCCTGTAATCCAAGGCAGCCAGCAGCATC
AGATAGGTGGTGTTCCACTGGGTTGTAACATCCAGACAAAGGGTCTTGGTACTGGGAATCTCCAAATGCAGAGCAATCTCAGCAAACTTCTCTTCACGGG
TAGGAGAAGCTTTAATAAACTTTATGCTCTCGCGGATATTGTAGACGACACCGTGAATTGAAGCAATGACATCCTGTGCTACGGCATTAAGAATATGGGC
ATAGCACCTCACAACAAACAGCTGTCCCTTGAGCATCAGATTGTTCTTGTTGGAGAGATGATCCCTTAGATTTGCACTGTAGATGTCGTGAGAGGAGCAT
TCATTATCCAGTGTGAT