Detailed information on CNT30345961


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0JLC5|AB36G_ORYSJ, E-value = 3e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552520Eragrostis tefOryza glaberrima21.163.6190.251forward
CNT30108659Eragrostis tefOryza longistaminata21.167.4590.251forward
CNT30100206Eragrostis tefOryza rufipogon21.163.4690.251forward
CNT30575121Eragrostis tefOryza barthii21.166.9490.251forward

Expression of CNT30345961

Peptides detected in this lncRNA

>peptide 1 (34 aa)
LHFAAKIPEDGAEEESNDGSEKEPNGIVGRVPPV*

Sequence

>CNT30345961
TTACACTTTGCCGCCAAGATCCCAGAAGATGGTGCCGAGGAGGAGAGCAATGATGGTAGTGAAAAAGAACCTAACGGTATTGTAGGGAGGGTTCCTCCAG
TATGACAGGTTCTGCTTCCACAGGCAAGCCATACATTGTGTGAAGGAAGACTGCGAATACTTGCTAGGGAAGTGCAGATCACTTGAACCATGCGCTGGTT
GGCTTAATTCCTTTATCAAGGCCTTGTTTCTCCTGTAAAAC