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Detailed information on CNT30344263


BLAST search results

BLAST vs Swiss-Prot:
sp|O23888|ALDO2_MAIZE, E-value = 3e-156

BLAST vs NONCODE:
NONORUT004017, E-value = 9e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100775Eragrostis tefOryza rufipogon30.4333.5280.77234forward
CNT30579091Eragrostis tefEchinochloa crusgalli57.3581.0788.21441forward
CNT30603900Eragrostis tefOryza punctata20.9421.982.61161forward

Expression of CNT30344263

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MALEIDTTDPISIPLQLLLITESSGIPLMSMYLS*

>peptide 2 (81 aa)
MLLGWYQPSSETAMAEPFACSTEDLISDLRKSGKVQTAPLLYPGSLLTSAGSSPFFQKQLRPRSSRSTSAAKLLQASTMGL*

Sequence

>CNT30344263
CGGATGGTGAAGCCACCTTGTTGAGGTGATCAGCAATCTTTTTGAAGACGAAATTTCCATCTGATAACACCTCAATGGCTTTAGAGATAGACACAACTGA
TCCAATCTCAATTCCCTTGCAGCTTCTGTTGATCACTGAGAGTTCTGGGATCCCCTTGATGTCAATGTACTTGTCATAGAGGTCTTCATCCTTGTATACT
CCAGACCCAGTGTTTGAGGCCACAATCTTCACAGAGTTTTCATCATACCAGTTAGAATCAAACAGCCTGTGAAGCTCTTGAATGCTCTTGGGATGGTACC
AGCCATCGTCCGAGACCGCCATGGCAGAACCATTTGCCTGCTCCACTGAGGACTTGATCTCGGACTTGAGGAAGTCTGGGAAAGTGCAGACGGCGCCACT
GTTATATCCCGGTAGCTTGCTCACTTCTGCAGGCTCGTCACCCTTCTTCCAAAAGCAGTTGAGGCCCAGGTCTTCGAGGTCAACGTCAGCTGCAAAACTC
TTGCAGGCATCGACGATGGGCCTGTAGCCAGTGCACCGGCACAGGTTGCCTGAGACAGCCTTCTCAGCTTCAGAAGCTGTGAGCTTGGAGAAGCCGGCGG
GCGGGGCGGGGCGGCCGCAATCCTTGTCAGCCTTGACGAGCGCGGAGAAGATGGACATGCACATGCCGGGCGTGCAGAAGCCGCACTGCGAGGCGTGGAA
GCCGGCGAGACGCTGCTGCACAGGGTGGTAGCCATCCTTGGTGTTGCCGATGCCCTCGCTGGTGGTCAC