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Detailed information on CNT30325346


BLAST search results

BLAST vs Swiss-Prot:
sp|P36886|PSAK_HORVU, E-value = 3e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671922Asparagus officinalisSetaria viridis24.2131.8686.09115forward
CNT30520562Asparagus officinalisSetaria italica33.0535.0484.71157forward
CNT30289849Asparagus officinalisTriticum aestivum29.8934.884.51142forward
CNT30436322Asparagus officinalisAegilops tauschii29.8933.5784.51142forward
CNT30242614Asparagus officinalisAvena sativa25.4733.8985.12121forward
CNT30659915Asparagus officinalisTriticum dicoccoides24.8432.5185.59118forward
CNT30102685Asparagus officinalisOryza rufipogon36.4232.8986.13173forward
CNT30581185Asparagus officinalisEchinochloa crusgalli34.3237.4784.05163forward

Expression of CNT30325346

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MIRGIDFEITLRICGNNWQYYDLRNSYLKKNPINKI*

>peptide 2 (93 aa)
MYTRRNKHWKNYRTPSQAAHRIPMFLSPKTTPTPIMWPTVPHASVSASVNPAGSPVCRPESRTSSLSPAVAFLFADGASPNRPANSIKLVVVTI

Sequence

>CNT30325346
CAATGATTCGAGGAATTGATTTTGAAATAACTCTTAGGATTTGCGGAAACAATTGGCAATATTATGACTTGAGGAACTCATATCTAAAAAAGAACCCCAT
AAACAAAATATAAAAAAGAAAACGGAATAAAAGGAGGATAGAAACAGTATATAACCGCTGAATGATTTCCGTCGTCACATAAAATCAACACATGTACACG
CGACGCAACAAACATTGGAAAAACTACCGAACGCCATCACAAGCTGCTCATAGGATCCCCATGTTCTTGAGCCCCAAGACGACCCCGACCCCCATTATGT
GGCCGACGGTACCGCACGCTAGCGTATCAGCCAGCGTGAACCCGGCGGGGTCGCCGGTCTGCAGGCCGGAGTCGCGAACTTCGAGCTTGAGTCCCGCCGT
GGCCTTCCTGTTTGCGGACGGCGCGAGCCCGAATCGGCCGGCGAATAGCATCAAGCTCGTGGTGGTCACCATTAT