Detailed information on CNT3032477


BLAST search results

BLAST vs Swiss-Prot:
sp|P29409|PGKH_SPIOL, E-value = 1e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693645Theobroma cacaoOryza sativa45.7722.6689.1392forward
CNT30176931Theobroma cacaoSecale cereale59.225.1181.51119forward
CNT30367636Theobroma cacaoSorghum bicolor53.7337.2482.41108forward
CNT30596272Theobroma cacaoOryza meridionalis45.774089.1392forward
CNT30358992Theobroma cacaoLactuca sativa65.6728.6384.09132forward
CNT30116795Theobroma cacaoOryza nivara42.2939.9189.4185forward
CNT30557143Theobroma cacaoPanicum hallii67.1618.183.7135forward

Expression of CNT3032477

Peptides detected in this lncRNA

>peptide 1 (33 aa)
FCNRKPATDGFKNFVTPSVDAWARCAVPNASLT*

Sequence

>CNT3032477
CTTCTGTAATAGGAAACCAGCAACTGATGGCTTCAAGAATTTTGTAACACCCTCAGTTGATGCATGGGCTCGGTGTGCTGTCCCAAATGCATCATTAACA
TAGAGATCAGCTAAGGAGGCAAGTTTCTTTGCAAATTCAGGAAGTGAAGCAACTAGCTTTTCTACTTCTGGACCAATGCAGTCATCAGCCTTAACAACCT
G