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Detailed information on CNT30317353


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30270405Corylus avellanaChenopodium quinoa7.3222.0788.7898forward
CNT30526301Corylus avellanaPhaseolus vulgaris8.0720.4290.74108forward
CNT30559435Corylus avellanaActinidia chinensis6.9525.287.193forward

Expression of CNT30317353

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MLAFMLEALRAYSLSVTPPPLSLSFCLCEFHLYIYKKWLRSFQIRYV*

>peptide 2 (55 aa)
MFDMSCPNYVDLCVCVCRSVTLSAICLISELKGGKKPVTAEFLVVYYVCTFIKNC*

>peptide 3 (69 aa)
KLCFKQMKQPDCWVLGKIYRGFVLCNSRQASKQAAADLFFFYYYFFYWVREVTEESEHTWFFLHAGFHA*

>peptide 4 (32 aa)
MRDAVDIWMVIIFVIAILLFSKFLQEEGVNLT*

>peptide 5 (35 aa)
MVEVISDPLCLICLALIMWICVCVCAEVSLCQLFA*

>peptide 6 (43 aa)
MVFLACWLSCLKLCVLTLYLSPHHLSLSLSVSVNFIYIYIKNG*

Sequence

>CNT30317353
AAGCTTTGCTTCAAACAGATGAAGCAGCCTGACTGTTGGGTTTTGGGGAAGATATATAGAGGCTTTGTCTTGTGCAATTCCAGACAAGCTAGCAAGCAAG
CAGCAGCCGATCTTTTTTTTTTTTATTATTATTTTTTTTATTGGGTAAGGGAGGTGACAGAAGAGAGTGAGCACACATGGTTTTTCTTGCATGCTGGCTT
TCATGCTTGAAGCTCTGCGTGCTTACTCTCTATCTGTCACCCCACCACCTCTCTCTCTCTCTTTCTGTCTCTGTGAATTTCATCTATATATATATAAAAA
ATGGTTGAGGTCATTTCAGATCCGTTATGTTTGATATGTCTTGCCCTAATTATGTGGATCTGTGTGTGTGTGTGTGCCGAAGTGTCACTTTGTCAGCTAT
TTGCTTGATTTCAGAACTAAAAGGGGGAAAAAAACCAGTAACAGCTGAATTCTTGGTCGTGTACTATGTTTGTACTTTCATCAAAAACTGTTAAGGTTTT
AACTTGGTTGGTTGGCATGTCATAACCATTTGAAGAACATCTATTCTTCTACAGTTTTGCTCCTTTTTTAATTTTCTTCTTTAAAATAAATGGACGTAAG
GTGTCAAATATGACCTTTCAGGGTGAGTTTATGGACAGATGAAAAGAGAAAAAGGGTAGCAGAGAAAGGAGAGTTTTTAACTTTTTACTGTCTACTATAC
AACTATGCGTGATGCCGTGGATATATGGATGGTTATAATATTTGTGATTGCAATATTATTGTTTTCTAAATTCCTACAGGAGGAAGGTGTTAATTTGACA
TGATCTAATGGTGAAAATGTTGGAAACCAAAGGAGTTGGAGTAATTAAGCCATAACAGCCCCCTTTTCTGTTCCTCTCTTAGTAATCAATTGTTCTGATC
ATAACAACAAGCCATGAAGATCCAGAAATTCTTGGTGGTTCTCCAGGATCCAACCCACATGCTAATATATATAGCCTGTTGATTTCTGCTAGCTGGAGCC
TGTGAGACTGTTATTCTTTTGTAGCTGTTGAACGTTGCTGGGTTTTTTTTTTTTTTTTTTGGTCTTTAGCATATCTCCTTGAAAATGTTTGTGAGAAGGT
TCCTGTTCTGTTTGCTGTTGAGAGGTTTTGTAGCAGAATTGAATCAATTTTTGTAGCTGATGGTCTTCCTGAAGGTCTAAGGTTGTTGATTTTTTCTTCA
AAGAATTTCTTTTGCTGTTATAGCTTCTAGAGAATTGAGTAGGGTTGTGAATATAGTTGTATTAGGATGCTTGTTGCATCTGGTGTTCTATCAAAAGTGT
GTATATTCTTTGTTGTGAATGAACTTCATTTGTTCCCAA