Detailed information on CNT30312751


BLAST search results

BLAST vs Swiss-Prot:
sp|O50055|COL1_ARATH, E-value = 4e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377462Camelina sativaArabidopsis thaliana63.058.8489.74273forward
CNT3079004Camelina sativaBrassica juncea29.3312.8291.34127forward

Expression of CNT30312751

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MVSLHGTVRVSRYRQNWNSLMASSKWVCRMNL*

Sequence

>CNT30312751
GAATAATACAAAAGCTTACCATATGACTTATTAAACCATTGGAGGAGCTTGGTGGAGCATAGGTGATGCCCAACTCAAAGTTCAGTTCCTCGTGGTGCTT
GTGACTCTTTGATTCGTCAACTTGAAGTGGAACGACTCCATCTCCTCTATAACTCCTCTCAGGCAACAACCACGAAGCCGCCTCCGCTTCATCTCTATCC
TCTTCTTCTTGACCTACCACCACCATGCTGTTCTCTGGATCTGTCACTGTTGTCTCACATGAATGGTTAGTCTCCATGGAACCGTAAGAGTTTCCAGATA
TCGGCAGAATTGGAACTCGCTGATGGCGTCTAGCAAGTGGGTTTGCAGAATGAATCTCTGAGTCACAGGCTGTGCATAGGGATGCAGCATCTGCCTTGCA
GAAAAAGGCAGCTGGAGCTCGCTCACATGATTG