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Detailed information on CNT30311441


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730504Camelina sativaCorchorus capsularis64.3797.7293.351158forward

Expression of CNT30311441

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 2 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 3 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 4 (53 aa)
MREIQKRIRLKFRNREVAVDGNVRESGDVGRGLGKSYLFCLTACPPWKWLSRR*

>peptide 5 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 6 (36 aa)
MERCRQGKSAKWIHNFGKRIGSEGWVRGSQFRTRRL*

>peptide 7 (49 aa)
MAQPEVGSSGWKSTARRVVSSALPAALENPEDRVPLTPGRTHNRIRSPR*

Sequence

>CNT30311441
AACTATCCCCGAAAATGGATGGCGCTAAAGAGCGCGACCTATACCAGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGGCGCGGCGGTCGCTG
TAAAACCTAGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAA
AGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGTCGGAGGAAACCCGTCTGATAGCGCTTATGCGCGAAATTCAAAAGAGGATCC
GGTTAAAATTCCGGAACCGGGAAGTGGCTGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCAGGGGCCTTGGGAAGAGTTATCTTTTCTGTTTAAC
AGCCTGCCCACCCTGGAAATGGCTCAGCCGGAGGTAGGATCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCTAGTGCGCTCCCGGCGGCCCTTG
AAAATCCGGAGGACCGAGTGCCACTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACGATGTAGACAA
GGGAAGTCGGCAAAATGGATCCATAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGTCCGGGGATCCCAGTTCCGAACCCGTCGGCTGTAGGCGAACT
GCTCGAGCTGCTTCCACGGCAAGAGCGGGTCGCTGCGTGCTGGCCGGGGGACGGATTGGGAACGGTTTCTTCGGGAACTTTCCCCGGGCATCGAACAGTC
AGCTCAAAACTGGTACAGACAAGGGGAATCTGACTGTTTAATTAAAAAAGCATTGCGATGGTCCTTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTG
CTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGTGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGT
GACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGA
AGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTCCGGTAGCCAAATGCCTCGTCATCTAATTA
GTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAA
GAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTCCGGCGCAAGTGAAATACCACTACTTTT
AACGTTATTTTACTTACTCCGTGAATCGGAGGCGGGGTACAACCCCTGTTTTTGGTCCCAAGACTCGCTTCGGCGGGTCGATCCGGGCGGAGGACATTGT
CAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGG
GTAAAAGCTCGTTTGATTCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCA
GAAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGCGAAG