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Detailed information on CNT30311091


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3061753Camelina sativaArabidopsis lyrata29.429.6888.34343forward

Expression of CNT30311091

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MYRPSDNMKLASITFGGKAYCLLWLNSRDRGKKSILLISFHYLSVFRGC*

>peptide 2 (38 aa)
MRREQESRDHIRLVALRIVRILHFHGCENLRKSAKSAV*

>peptide 3 (35 aa)
MTHSCVQHLSCLVGDIHIIFTMWKLQDMILSRFED*

>peptide 4 (30 aa)
MSVVTSLFEFTIYCSFIRSQLIALGSQRKS*

Sequence

>CNT30311091
CATGACTCATGAGTGTTGTCACATCTCTGTTTGAGTTTACTATTTATTGTAGCTTTATTAGATCTCAACTTATAGCTTTAGGATCGCAGAGGAAGTCGTG
AAGTTTTGAGCTACTCGTGTAAAGTACTTTTGCTTGTTAGTTTCTTGTTTAGCAAATGCAAGCTATTTGATGACCCATTCATGTGTTCAGCATTTGAGTT
GCCTTGTTGGTGATATACACATAATATTTACTATGTGGAAGCTACAGGATATGATACTCTCTAGGTTTGAGGACTAGCTCCACTTACGCTTTTGAGTCCA
GTGGATGTATGATACCCATTTTGTGGTCCAAAAAGAATGAGATTTGATGGACGCTCTAGAGGCCAAATTCATGTGGTTTCCTTCACTCTATATCTTCAGA
GCTGAAAAGTGAGTTTTTTTTGTATAAAATGCTGGTCCTAGGATACACTTTTCGCATCTCTTCCTCTTTCATATTTGCTTAGACCGCAATTCTCTTCCCC
ATATGGGTAAATTTTAAACTTTGAAAAGGTTTTCGTTTTTTTTCCTTGGTAATTCGAATTTAACAATTCTTTTTGTTATTTACTGGTATGAGTAATGTAA
TGGCATGTAGAAATGGTTTCATGATCATTGAATTCTAAAGAAAAAAAGATTCTAGGTTCTTTACATAAGTAAGATCTTTAATCGTACCAAATTGGATAAG
TTGAGGCATCTTTGGCGTTAGTGCTTTCATGATGAAAAATGCACTTGTAGTTCAAGAAAATAGTATTTCACTTATTATTGCTCTTTGAGAATCTGCAAGA
TTAAATTTCATCGTTGTTACTGTTCTGAACTTCTGTCACATGTATAGGCCTTCAGATAACATGAAACTTGCATCGATAACTTTTGGAGGAAAAGCATATT
GCTTATTGTGGCTCAATTCTAGAGATCGAGGAAAGAAAAGTATATTGCTTATTAGTTTTCATTATTTATCAGTTTTCCGTGGTTGCTAAGTTTACTTCTT
TCAGATTTACGGAAAGCCTATTTCCTTGCAAAGAATGAGAAGGGAACAAGAGTCGAGGGACCATATAAGGCTTGTAGCTTTACGTATTGTGCGGATTCTC
CACTTCCATGGCTGTGAGAATCTGAGGAAAAGTGCAAAAAGTGCAGTGTGACCTTCAGCTAAAGGT