Detailed information on CNT30310591


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30543852Camelina sativaBrassica napus35.5913.5789.24158forward
CNT30236836Camelina sativaBrassica oleracea13.9621.9191.9462forward
CNT3081344Camelina sativaBrassica juncea33.336.1491.22148forward
CNT30612830Camelina sativaArabis alpina35.3612.191.08157forward

Expression of CNT30310591

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MVGNSIPTLHNKVSSSKLSRNRTSQKALRHQRLFFRSR*

Sequence

>CNT30310591
CTTCGTGTGATTTTGCACCAGTGAGCTTCACCAGTTCCTGGAGAAATATAAGCACATGATAATTCACTTTAGAATCTTTTGGAGAACTTATATCTATTGA
CGAAGGAGTCGGCATTAACAATTTTGTGATTTTGCAGAACTTTTTTGATTACTCACAGAGATTACGCGCTTAGCAGTGTTCCACAGTGTTGGAAGTGCTT
TGCCTTCAACAATCTCGCACTCGGCGGCCACTTTTAAACTCTTGTACCTCACTTCTATGGTCGGTAACTCCATCCCAACTCTGCACAACAAAGTTTCAAG
CTCAAAACTCTCAAGAAACCGAACATCACAAAAGGCTTTGAGACATCAACGACTCTTTTTCCGTTCTCGGTGATGGACTTATCGCCATCATCGATAAGAG
TCGATCTCATACGTTTTGCAGTTGGTTCATATATTGAAGAGTTG