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Detailed information on CNT30307945


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 6e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695489Triticum aestivumOryza sativa33.628.990.61213forward
CNT30675769Triticum aestivumSetaria viridis29.9730.5592.63190forward
CNT30442843Triticum aestivumAegilops tauschii53.1551.4599.7337forward
CNT30670012Triticum aestivumTriticum dicoccoides73.0368.1995.25463forward
CNT3011815Triticum aestivumZea mays34.3826.0585.78218forward
CNT30596741Triticum aestivumOryza meridionalis33.626.4391.55213forward
CNT30370929Triticum aestivumOryza glumipatula33.627.7790.61213forward
CNT30103152Triticum aestivumOryza rufipogon33.625.5490.61213forward
CNT30584428Triticum aestivumEchinochloa crusgalli37.8523.0588.75240forward
CNT30117400Triticum aestivumOryza nivara33.624.5790.61213forward

Expression of CNT30307945

Peptides detected in this lncRNA

>peptide 1 (48 aa)
YVHASITTVVYLTVQKGNSETLLLDQITHRAIHSSTNKSEYLAMSMHA*

Sequence

>CNT30307945
ATTACGTACACGCTAGTATTACGACAGTAGTATATCTTACGGTACAAAAAGGTAATTCGGAGACATTATTACTTGACCAAATCACGCATCGAGCAATTCA
TTCGAGCACAAACAAATCGGAGTATCTGGCCATGTCAATGCATGCATGATAAGGAGATAATATGATATCAGCTCGATCTCGTTGCAAAGAGAGATAGGTA
TAGCAGCTTATGCGGTGAGCTCCTCCTCCTTGTGGGTCTCGATGACGATGTCGGACTTGGGGTAGGCGTGGCAGGTGAGCACCCACCCGGCCTCCATCTG
GTCGTCGTCGAGGAAGCTCTGGTCGGACTGGTCGATCCCCTCCTCCTCGGCCTGGTCGAGGATGTAGACGTCGTCGGGGACCTCCAGCTCCACCTCGCCC
TCGGGCGTCACCAGCTTCACCTTGTACGTCGCCTGCGCGCGGAGCCTGGCTCCCCGCACCTGCTTGGCGGCGGCGAGGCTGAGGGCCGCGGGCGCCAGGG
CCACGCGGGGCGCCGGTGGCGCCACGGCGCGCACGGAGAAGGGCGCGCGGAGGCTCAGTGCGGCGGCCATTGGTGGCTAGCTAGCTGGAGCTTGGACGCT
CTTTCTCTGTGTGGCTGAGAAGGTGGAGAGGATA