Detailed information on CNT30305219


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30398888Triticum aestivumTriticum turgidum68.36100.1199.54877forward
CNT30443837Triticum aestivumAegilops tauschii85.11101.3993.961092forward
CNT30668156Triticum aestivumTriticum dicoccoides10092.641001283forward
CNT30688313Triticum aestivumTriticum urartu47.765.0497.71612forward

Expression of CNT30305219

Peptides detected in this lncRNA

>peptide 1 (60 aa)
TLSLSPLASAFPPTFPSPKNQFHAPAARNLLFSIIVLLPLGFQPPPWNPRPSADPSPAAF*

>peptide 2 (84 aa)
YSFPLPSRLRLPSDFSLAEKPIPCSSSTQPPILHYSIAPARVPAASMESAAVCRSFTSRLLGPPRLPQPGMLGLGRVWPPAPRV*

>peptide 3 (45 aa)
MARLGAEGLARSRWIVGAAISLATLRGFVKVDGEPLQGDVVAFFF*

>peptide 4 (33 aa)
MGRLRPRGIHVLRRRLSWRFVTAVVNQHKRWHA*

>peptide 5 (35 aa)
LLFPSPLSPPPSLRLFPRRKTNSMLQQHATSYSPL*

>peptide 6 (36 aa)
MVVSTGRTIMCLREPPIDAPCEVMLTFSFLFGKVME*

>peptide 7 (39 aa)
MALMGRCLRGADGEVETSWNPCSQAEAKLAICHCSCESA*

>peptide 8 (40 aa)
MGHHNRDFLASCAVAVSSLLTPFARPQCEIGNLVRTCFQM*

Sequence

>CNT30305219
CTACTCTTTCCCTCTCCCCTCTCGCCTCCGCCTTCCCTCCGACTTTTCCCTCGCCGAAAAACCAATTCCATGCTCCAGCAGCACGCAACCTCCTATTCTC
CATTATAGTATTGCTCCCGCTAGGGTTCCAGCCGCCTCCATGGAATCCGCGGCCGTCTGCAGATCCTTCACCAGCCGCCTTTTAGGTCCGCCTCGCCTCC
CGCAGCCGGGAATGCTTGGTCTCGGGCGCGTCTGGCCGCCTGCGCCGAGGGTTTGAGTTATTGCATGTGGTGGCACCAAGCATGAGGCGACAACTGCATT
ACTTGCAAGGAAGTTACAAAATCTATGGGTCATCATAATCGTGACTTTCTTGCAAGTTGTGCAGTTGCTGTCTCAAGCTTGCTGACTCCGTTTGCCAGAC
CGCAATGTGAAATAGGAAATTTAGTCAGAACTTGTTTCCAGATGTAAAACTTTAATCGGATATCTCTATACTTAAAAGGGTACTAGTGGATTAAGGATAC
AAGAGTGCATCCTAAGTTGCAATGGTTGTATCCACGGGAAGAACAATTATGTGTCTACGAGAACCTCCAATTGATGCACCATGTGAAGTCATGTTGACAT
TTTCTTTTCTCTTTGGTAAGGTTATGGAATAAATTTTATTTTCCCTAGTATTGTGTTAGTGGTGTATATATTCACTAAACAAGGTTCTTCCATTCCTCTG
TTTCCATATGCCGCTGCACCATCATCCACTGCCATGCTGAGGTGGTGGAGATTAGCAGGCAGCAGTCTTAATGGCGTTGATGGGGAGGTGTCTTCGCGGT
GCTGATGGGGAGGTTGAGACCTCGTGGAATCCATGTTCTCAGGCGGAGGCTAAGTTGGCGATTTGTCACTGCAGTTGTGAATCAGCATAAGAGATGGCAC
GCTTAGGTGCCGAGGGCCTCGCTAGATCCAGATGGATTGTAGGAGCCGCAATCTCGCTCGCCACTCTGCGGGGGTTTGTCAAGGTTGATGGCGAGCCTCT
ACAGGGTGATGTAGTGGCTTTTTTTTTTTGAAAAAACTCAGACTTTATTCATTTGTAATAAGTAATACATCGTTTGTGAGGATCATTACAATTTCATTTA
AGGGCTCCTCAAACCAATCGGAAGTCAAAGAAAATCTAGCTGGAAATCAGGGTGAATGGGTGATGTAGTGGCTAGTCTGGATGAATAGGCAGAGGAAAGG
CTGACGGGACGAAATGACCCTCCTTACTTGATCAGGTTATGTATGGTGTTCCTGGTGGTGGAGTTGGGCACAGTCTGAAACCG