Detailed information on CNT30304883


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226134Triticum aestivumHordeum vulgare31.2728.792.04339forward
CNT30669134Triticum aestivumTriticum dicoccoides80.995.95100877forward

Expression of CNT30304883

Peptides detected in this lncRNA

>peptide 1 (35 aa)
LLFPSPLSPPPSLRLFPRRKTNSMLQQHATSYSPL*

>peptide 2 (33 aa)
MGRLRPRGIHVLRRRLSWRFVTAVVNQHKRWHA*

>peptide 3 (39 aa)
MGHHNRDFLASCAVAVSSLLTPFARPQCEIGNLVRVLVD*

>peptide 4 (45 aa)
MARLGAEGLARSRWIVGAAISLATLRGFVKVDGEPLQGDVVAFFF*

>peptide 5 (60 aa)
TLSLSPLASAFPPTFPSPKNQFHAPAARNLLFSIIVLLPLGFQPPPWNPRPSADPSPAAF*

>peptide 6 (84 aa)
YSFPLPSRLRLPSDFSLAEKPIPCSSSTQPPILHYSIAPARVPAASMESAAVCRSFTSRLLGPPRLPQPGMLGLGRVWPPAPRV*

>peptide 7 (36 aa)
MVVSTGRTIMCLREPPIDAPCEVMLTFSFLFGKVME*

>peptide 8 (39 aa)
MALMGRCLRGADGEVETSWNPCSQAEAKLAICHCSCESA*

Sequence

>CNT30304883
CTACTCTTTCCCTCTCCCCTCTCGCCTCCGCCTTCCCTCCGACTTTTCCCTCGCCGAAAAACCAATTCCATGCTCCAGCAGCACGCAACCTCCTATTCTC
CATTATAGTATTGCTCCCGCTAGGGTTCCAGCCGCCTCCATGGAATCCGCGGCCGTCTGCAGATCCTTCACCAGCCGCCTTTTAGGTCCGCCTCGCCTCC
CGCAGCCGGGAATGCTTGGTCTCGGGCGCGTCTGGCCGCCTGCGCCGAGGGTTTGAGTTATTGCATGTGGTGGCACCAAGCATGAGGCGACAACTGCATT
ACTTGCAAGGAAGTTACAAAATCTATGGGTCATCATAATCGTGACTTTCTTGCAAGTTGTGCAGTTGCTGTCTCAAGCTTGCTGACTCCGTTTGCCAGAC
CGCAATGTGAAATAGGAAATTTAGTCAGGGTACTAGTGGATTAAGGATACAAGAGTGCATCCTAAGTTGCAATGGTTGTATCCACGGGAAGAACAATTAT
GTGTCTACGAGAACCTCCAATTGATGCACCATGTGAAGTCATGTTGACATTTTCTTTTCTCTTTGGTAAGGTTATGGAATAAATTTTATTTTCCCTAGTA
TTGTGTTAGTGGTGTATATATTCACTAAACAAGGTTCTTCCATTCCTCTGTTTCCATATGCCGCTGCACCATCATCCACTGCCATGCTGAGGTGGTGGAG
ATTAGCAGGCAGCAGTCTTAATGGCGTTGATGGGGAGGTGTCTTCGCGGTGCTGATGGGGAGGTTGAGACCTCGTGGAATCCATGTTCTCAGGCGGAGGC
TAAGTTGGCGATTTGTCACTGCAGTTGTGAATCAGCATAAGAGATGGCACGCTTAGGTGCCGAGGGCCTCGCTAGATCCAGATGGATTGTAGGAGCCGCA
ATCTCGCTCGCCACTCTGCGGGGGTTTGTCAAGGTTGATGGCGAGCCTCTACAGGGTGATGTAGTGGCTTTTTTTTTTTGAAAAAACTCAGACTTTATTC
ATTTGTAATAAGTAATACATCGTTTGTGAGGATCATTACAATTTCATTTAAGGGCTCCTCAAACCAATCGGAAGTCAAAGAAAA