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Detailed information on CNT30304072


BLAST search results

BLAST vs Swiss-Prot:
sp|A3F5L3|DES2_SORBI, E-value = 3e-125

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617758Triticum aestivumSesamum indicum5.1224.3591.0756forward
CNT3021318Triticum aestivumCitrullus lanatus17.5721.7282.81192forward
CNT30395404Triticum aestivumTriticum turgidum32.398.8897.17353forward
CNT30589659Triticum aestivumMusa acuminata11.8945.1492.31130forward
CNT30442203Triticum aestivumAegilops tauschii86.8386.1999.79949forward
CNT30254552Triticum aestivumAvena sativa15.4637.8994.67169forward
CNT30666984Triticum aestivumTriticum dicoccoides73.7483.0196.65806forward
CNT3075396Triticum aestivumBrassica juncea16.7440.1382.51183forward
CNT30650498Triticum aestivumRosa chinensis11.822.8781.4129forward
CNT30120535Triticum aestivumCitrus clementina9.7924.683.18107forward
CNT30583774Triticum aestivumEchinochloa crusgalli51.0532.6986.56558forward

Expression of CNT30304072

Peptides detected in this lncRNA

>peptide 1 (70 aa)
VHGGERPTQPVPLRRVVVRQGRVGVLQVGDQDQPRVHDQQRHAVHPHHPPEPERRHKLQQSQRHGQHSHV*

>peptide 2 (78 aa)
MTQTPVMDHVGEGLDDRALEAVRRDCLLDLTQRERRLVRRRALVGCAAVGTAELLLLLPLLLRHPAAGTHVAADNKKA*

>peptide 3 (36 aa)
MLLLTTKKHRWSDGTNEVIMYSYHNRSRTEQYILAA*

Sequence

>CNT30304072
GTCCATGGTGGCGAGCGCCCCACGCAGCCAGTCCCACTCCGTCGAGTCGTAGTGCGGCAGGGCCGGGTGGGTGTGCTGCAGGTAGGTGATCAGGACCAGC
CACGCGTTCACGATCAGCAGCGGCACGCCGTACACCCGCACCACCCACCAGAACCCGAACGACGACACAAGCTTCAGCAGAGCCAACGACACGGCCAGCA
CTCCCACGTCTGAGATGAAGATCTGAGCGCGCTCCCGGTCGTTGTAGATCGGGCCGTAGGGGTCGAAGTGGCAGGCGAAGCGCGGGTACGGGCGGCCCGA
GGCGTTGAGCGCCAGGTACAGCGGCCACCCGAGGGTGAGCTGCACGACGATGTGCACCAGACGGCCGATGGGGTTGTTGTAGATGTAAGGAGTGTACCAC
GCCAGCGCCTCCTTCTGCTTGGGGACGAACACCTCATCACGCTCCAGCGACCCGGTGTTGGAGTGGTGGCGACGGTGGCTGTACTTCCACGAGAAGTAGG
GGACGAGCAGCCACGAGTGGAGCACCAGGCCGACGGTGTCGTCGAGCAGTGAGTAGTCGGAGAAGGCGTGGTGGCCGCACTCGTGGGCAATGACCCAAAC
GCCGGTCATGGACCACGTAGGAGAAGGACTTGATGATCGAGCGCTGGAAGCAGTGAGGCGGGATTGCCTTCTTGATCTGACCCAGCGTGAACGGCGGCTT
GTCCGTCGGCGAGCGCTGGTAGGCTGCGCCGCCGTTGGCACGGCCGAGCTGCTCCTGCTTCTCCCGCTCCTTCTCCGTCATCCTGCCGCCGGCACCCATG
TTGCTGCTGACAACAAAAAAGCATAGGTGGTCAGATGGCACGAACGAGGTTATAATGTATTCTTATCATAATAGATCAAGAACAGAACAGTATATTCTAG
CAGCATGATTCTACAATATTGCTATGAACGAAAATATCTATTAAGCTGACTATACTCTAGTTCTGCTGGCGCACGACAGGGGCAGCGACGCAAGGAAAAC
ACGAGGGGGTGTTATATCATCGCCCACGGTGGTGGTGGCGTGCCCCGATGCTAACAAGATAAAATATTCCTCCCTTCAAAAATATTCCTTTCT