Detailed information on CNT30302990


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670613Triticum aestivumSetaria viridis71.8352.5889.22204forward
CNT30639803Triticum aestivumNymphaea colorata42.2522.383.33120forward
CNT30515079Triticum aestivumJuglans regia65.8536.5280.75187forward
CNT30372291Triticum aestivumArabidopsis thaliana37.6832.3385.98107forward
CNT30636687Triticum aestivumCapsicum annuum43.6615.6480.65124reverse complement
CNT30188720Triticum aestivumSecale cereale20.4212.7896.5558forward
CNT309074Triticum aestivumZea mays57.7556.9490.85164forward
CNT30217218Triticum aestivumKalanchoe fedtschenkoi26.0614.2385.1474forward
CNT30649581Triticum aestivumRosa chinensis41.918.7183.19119forward
CNT30595676Triticum aestivumOryza meridionalis69.3749.2587.82197forward

Expression of CNT30302990

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MNRPAVAHWVAILTQTDGHPTSTSFPLSPTEVDQPVRSIAEYMLAREKMRWKN

Sequence

>CNT30302990
AACAGAGATAGATCGACTTCAATATATATACAACCAAGACCGTATCTTGAAATACTGGCAACAATGCCTTAGGTCGATCTAGAACTCCCTGTCTGGGAAC
AGGAGGGGAGCGACGAGGGACCAGATGAACAGACCTGCCGTTGCCCACTGGGTCGCAATCCTGACCCAGACAGACGGCCACCCGACATCAACAAGCTTTC
CACTCTCACCGACCGAGGTCGACCAGCCAGTGAGGAGCATCGCCGAGTACATGCTTGCCAGGGAGAAGATGAGGTGGAAGAACG