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Detailed information on CNT30302575


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225888Triticum aestivumHordeum vulgare30.621.6288.39112forward
CNT30458448Triticum aestivumSaccharum spontaneum39.3421.8297.22144forward
CNT30369692Triticum aestivumOryza glumipatula35.2519.6994.57129forward
CNT30100365Triticum aestivumOryza rufipogon40.1624.7193.2147forward
CNT30575092Triticum aestivumOryza barthii38.5218.3193.62141forward

Expression of CNT30302575

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MQPNGKGNILEEFRPNPPMATTKPNPPLIIARRSALIGFRASTGWWSRRSSR*

Sequence

>CNT30302575
TGACACGCCTCTTGCCACCCACCACCCAAAGACGAGAGAAGAGAGACCAGACACCCTGATGACGACGACGATGATGTGACCTACCTAAACGGACTACGCG
TAGTATGCAACCAAACGGAAAAGGAAATATCTTGGAAGAATTTCGTCCAAATCCTCCAATGGCCACCACCAAACCCAACCCACCACTGATCATCGCACGG
CGATCGGCGCTGATCGGCTTCAGGGCTTCCACAGGATGGTGGTCTCGGCGATCATCGAGGTGACCACGTAGGGGTCCATGTTGGACGCCGGCCGGCGGTC
CTCGAAGTAGCCCTTGCCGTTCTGCTCCGTCTCCCGGCCCACGCGCACCGACGCGCCACGGTTCGC