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Detailed information on CNT30302147


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691018Triticum aestivumOryza sativa36.5434.1782.1195forward
CNT30670622Triticum aestivumSetaria viridis21.9213.8389.4757forward
CNT30520004Triticum aestivumSetaria italica21.9211.1889.4757forward
CNT30190689Triticum aestivumSecale cereale47.6946.4491.94124forward
CNT30225906Triticum aestivumHordeum vulgare8543.7691.4221forward
CNT30441345Triticum aestivumAegilops tauschii38.8548.195.05101forward
CNT30254530Triticum aestivumAvena sativa61.5417.0890.62160forward
CNT30461578Triticum aestivumSaccharum spontaneum20.7717.6588.8954forward
CNT30139600Triticum aestivumLolium perenne47.3118.5886.99123forward
CNT30364978Triticum aestivumSorghum bicolor20.3812.0588.6853forward
CNT30150238Triticum aestivumBrachypodium distachyon49.233289.06128forward
CNT30584157Triticum aestivumEchinochloa crusgalli48.8520.9281.1127forward

Expression of CNT30302147

Peptides detected in this lncRNA

>peptide 1 (85 aa)
GHSIVIPKHSRKQAEAPTPQHFQHCGTKCSRVISIRGLLALGWLCWGPAIAPFTGRRWRPAGASRTGRRWRPAVTSLPGRPIPWTV

>peptide 2 (85 aa)
WPFNSHTKTFKETSGGPHPPTLPALWNQVLTRYQHKGTPRAGVAVLGTCYSSVHGQAVETCWCFAHGQAVETCCNFASWETDPVDC

Sequence

>CNT30302147
TGGCCATTCAATAGTCATACCAAAACATTCAAGGAAACAAGCGGAGGCCCCCACCCCCCAACACTTCCAGCATTGTGGAACCAAGTGCTCACGCGTTATC
AGCATAAGGGGACTCCTCGCGCTGGGGTGGCTGTGCTGGGGACCTGCTATAGCTCCGTTCACGGGCAGGCGGTGGAGACCTGCTGGTGCTTCGCGCACGG
GCAGGCGGTGGAGACCTGCTGTAACTTCGCTTCCTGGGAGACCGATCCCGTGGACTGTAG