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Detailed information on CNT30301323


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728738Triticum aestivumCorchorus capsularis20.9716.284.62104forward
CNT30709030Triticum aestivumGlycine max2527.8789.52124forward
CNT30650814Triticum aestivumRosa chinensis22.5838.7587.5112forward
CNT30344011Triticum aestivumEragrostis tef29.239.4996.55145forward
CNT30364601Triticum aestivumSorghum bicolor17.5431.9995.487forward
CNT30575210Triticum aestivumOryza barthii23.5915.3997.44117forward
CNT30592968Triticum aestivumEragrostis curvula2517.1795.97124forward

Expression of CNT30301323

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MHHRFVSRNINAGEDGATAPSACRGRDATGRRGSVVELDDEGGDGEEDPVEEQRGGDEEGVALGLHDGLLVAEVLGGGAGVLVV

>peptide 2 (42 aa)
TNIHEEQVNEKYDSSMAIQIYGSETHSQERFAGTVFMMIFIA*

>peptide 3 (36 aa)
QTSMRNKLMKSMIPAWLSKFMVLRHIRKNVLQEQCS*

Sequence

>CNT30301323
AACAAACATCCATGAGGAACAAGTTAATGAAAAGTATGATTCCAGCATGGCTATCCAAATTTATGGTTCTGAGACACATTCGCAAGAACGTTTTGCAGGA
ACAGTGTTCATGATGATCTTTATCGCATAAAGACCTATTTTACTCGAACTAGATCTGAAGCAGGTAAGTGATAACAGAACGCTAGCGAAATCCGGATCGC
GATCTCAAACATCCACACTACAAAGGAAGAAGAACACGGAACGCATGCATCACAGGTTTGTATCTAGGAACATAAACGCGGGAGAAGACGGAGCAACGGC
ACCGTCGGCCTGCCGGGGCCGGGACGCGACGGGGAGGAGGGGATCAGTGGTCGAGCTTGACGACGAGGGAGGTGACGGAGAAGAGGATCCAGTAGAGGAG
CAGCGCGGCGGCGATGAGGAGGGCGTTGCGCTGGGACTTCATGATGGACTTCTGGTGGCGGAGGTGCTCGGAGGGGGTGCAGGCGTGCTCGTCGTC