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Detailed information on CNT30298930


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 5e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639185Triticum aestivumNymphaea colorata17.5734.1981.51146forward
CNT30630495Triticum aestivumVigna unguiculata17.5725.7580.82146forward
CNT30710271Triticum aestivumGlycine max21.7836.3583.98181forward
CNT30249341Triticum aestivumAvena sativa40.0755.0494.89333forward
CNT30666088Triticum aestivumTriticum dicoccoides59.6961.85100496forward
CNT30446699Triticum aestivumSaccharum spontaneum23.5921.8590.82196forward
CNT30651308Triticum aestivumRosa chinensis16.2523.4483.7135forward
CNT30362113Triticum aestivumSorghum bicolor16.8521.1597.86140forward
CNT30619829Triticum aestivumCajanus cajan23.3519.6882.47194forward
CNT30579578Triticum aestivumEchinochloa crusgalli42.1242.5388.29350forward
CNT30558912Triticum aestivumPanicum hallii8.0626.0797.0167forward
CNT3049718Triticum aestivumCucumis sativus17.6928.1680.95147forward

Expression of CNT30298930

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MARVAGRGLAEGDQAAVIRWRVAAEACVAMAMAVALQARWFLAREEMGGGAEATRARGRWGCVWWVMSRR

>peptide 2 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

Sequence

>CNT30298930
AGCCGATCATGCATATGAACAACGTTAACATACAGCAGTATCATCATCAAATTACCATGTACATATAACCTGATGCATCATTATCACCGATCGAATCCAT
CATTCAAACTCGACAATTAAAATTACAGGACGTCCATCATCATCGCCACCCGCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTAC
GAGATTAGATGTCGAAGGAGTTCTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCC
GGCGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGGAGGCACTGCTCCTTGCGGGCGAGCTTGAGGAGGTTGGGCCCCTCGCGCATGATGGCGGCG
CCGCCAGTGGGCATCTCGAAGACCTGCTCCTTGGGGGAGGTCCAGGTGATGACGTAGAACTCCTCGACCTGGGCCTTGCGGAGGAGGCCGCCCGTGCTGC
CGCCGAAGATCGGGGACGGGGTGGACGGGTCCAGCTGCGGCGGCACGAAGCCCGCGGGGGCGGGCTCCGCCGGCGGCGCCGCTGGGGCGGGGCGGGGCCG
GGCCGCGGGCGGAGGATGGCATGGCGAGGGTGGCGGGGCGGGGCTTGGCGGAGGGCGACCAGGCCGCGGTGATCAGGTGGCGCGTCGCCGCCGAGGCTTG
CGTGGCCATGGCCATGGCGGTGGCGCTCCAAGCTCGGTGGTTCTTGGCGAGAGAGGAGATGGGGGGAGGAGCCGAGGCCACACGCGCGCGCGGGAGATGG
GGTTGTGTCTGGTGGGTGATGAGTAGGAGAG