Detailed information on CNT30290573


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693017Triticum aestivumOryza sativa26.415.6285.3375forward
CNT30221717Triticum aestivumHordeum vulgare42.2548.5886.67120forward
CNT30596085Triticum aestivumOryza meridionalis26.414.785.3375forward
CNT30101479Triticum aestivumOryza rufipogon26.417.1885.3375forward

Expression of CNT30290573

Peptides detected in this lncRNA

>peptide 1 (54 aa)
QHEGVAGSKDGEVGAGDGPAAGAVHGGADALDEVERHRPERQVGPHPLLAVIPG*

>peptide 2 (93 aa)
STRESRVARTVRSAQETVRPQARCTAARMLSMRLSATGRSVRLGPIPCSLLFPVRSTEATTTRAAAALDAIFLTLQQMDGAIGFPGTKGCRVAS

Sequence

>CNT30290573
CCAGCACGAGGGAGTCGCGGGTAGCAAGGACGGTGAGGTCGGCGCAGGAGACGGTCCGGCCGCAGGCGCGGTGCACGGCGGCGCGGATGCTCTCGATGAG
GTTGAGCGCCACCGGCCGGAGCGTCAGGTTGGGCCCCATCCCCTGCTCGCTGTTATTCCCGGTTAGGAGCACCGAGGCCACGACGACGAGGGCCGCTGCT
GCTCTGGACGCCATCTTTCTCACTCTGCAGCAGATGGATGGAGCTATAGGATTTCCAGGTACTAAAGGGTGTCGTGTGGCTTCC